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GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks

Protecting medical privacy can create obstacles in the analysis and distribution of healthcare graphs and statistical inferences accompanying them. We pose a graph simulation model which generates networks using degree and property augmentation and provide a flexible R package that allows users to c...

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Detalles Bibliográficos
Autores principales: Bobak, Carly A., Zhao, Yifan, Levy, Joshua J., O’Malley, A. James
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10173245/
https://www.ncbi.nlm.nih.gov/pubmed/37188323
http://dx.doi.org/10.1007/s41109-023-00548-5
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author Bobak, Carly A.
Zhao, Yifan
Levy, Joshua J.
O’Malley, A. James
author_facet Bobak, Carly A.
Zhao, Yifan
Levy, Joshua J.
O’Malley, A. James
author_sort Bobak, Carly A.
collection PubMed
description Protecting medical privacy can create obstacles in the analysis and distribution of healthcare graphs and statistical inferences accompanying them. We pose a graph simulation model which generates networks using degree and property augmentation and provide a flexible R package that allows users to create graphs that preserve vertex attribute relationships and approximating the retention of topological properties observed in the original graph (e.g., community structure). We illustrate our proposed algorithm using a case study based on Zachary’s karate network and a patient-sharing graph generated from Medicare claims data in 2019. In both cases, we find that community structure is preserved, and normalized root mean square error between cumulative distributions of the degrees across the generated and the original graphs is low (0.0508 and 0.0514 respectively).
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spelling pubmed-101732452023-05-13 GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks Bobak, Carly A. Zhao, Yifan Levy, Joshua J. O’Malley, A. James Appl Netw Sci Research Protecting medical privacy can create obstacles in the analysis and distribution of healthcare graphs and statistical inferences accompanying them. We pose a graph simulation model which generates networks using degree and property augmentation and provide a flexible R package that allows users to create graphs that preserve vertex attribute relationships and approximating the retention of topological properties observed in the original graph (e.g., community structure). We illustrate our proposed algorithm using a case study based on Zachary’s karate network and a patient-sharing graph generated from Medicare claims data in 2019. In both cases, we find that community structure is preserved, and normalized root mean square error between cumulative distributions of the degrees across the generated and the original graphs is low (0.0508 and 0.0514 respectively). Springer International Publishing 2023-05-11 2023 /pmc/articles/PMC10173245/ /pubmed/37188323 http://dx.doi.org/10.1007/s41109-023-00548-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research
Bobak, Carly A.
Zhao, Yifan
Levy, Joshua J.
O’Malley, A. James
GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks
title GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks
title_full GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks
title_fullStr GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks
title_full_unstemmed GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks
title_short GRANDPA: GeneRAtive network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks
title_sort grandpa: generative network sampling using degree and property augmentation applied to the analysis of partially confidential healthcare networks
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10173245/
https://www.ncbi.nlm.nih.gov/pubmed/37188323
http://dx.doi.org/10.1007/s41109-023-00548-5
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