Cargando…

Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review

Danggui Sini is a traditional Chinese medicine prescription for treating peripheral nerve injury (PNI). We studied the mechanisms of this decoction through network pharmacology analysis and molecular docking. Using R language and Perl software, the active components and predicted targets of Danggui...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Ning, Zhang, Dandan, Zhang, Qian, Zhang, Ruisu, Wang, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10174355/
https://www.ncbi.nlm.nih.gov/pubmed/37171334
http://dx.doi.org/10.1097/MD.0000000000033528
_version_ 1785040010993467392
author Zhang, Ning
Zhang, Dandan
Zhang, Qian
Zhang, Ruisu
Wang, Yan
author_facet Zhang, Ning
Zhang, Dandan
Zhang, Qian
Zhang, Ruisu
Wang, Yan
author_sort Zhang, Ning
collection PubMed
description Danggui Sini is a traditional Chinese medicine prescription for treating peripheral nerve injury (PNI). We studied the mechanisms of this decoction through network pharmacology analysis and molecular docking. Using R language and Perl software, the active components and predicted targets of Danggui Sini, as well as the related gene targets of PNI, were mined through TCMSP, GeneCards, OMIM, TTD, and DrugBank. The network diagram of active components and intersection targets was constructed using Cytoscape software and the STRING database. The CytoNCA plug-in was used to screen out the core compounds and key targets. The genes were analyzed for Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment. AutoDock was used to analyze the molecular docking of key targets and core compounds of diseases. The drug component disease target regulatory network showed that the key components included quercetin, kaempferol, naringenin, and licochalcone A, which play key roles in the whole network and may be the primary compounds associated with the action of Danggui Sini against PNI. PPI network topology analysis showed high degree values for RELA, JUN, MAPK1, RB1, and FOS. Enrichment analysis showed that the core targets of Danggui Sini participated in pathways associated with neurogenesis-multiple diseases. Molecular docking showed that the active ingredients in Danggui Sini had a good binding ability with key targets. We conclude that many active components of Danggui Sini play therapeutic roles in PNI treatment by regulating RELA, JUN, MAPK1, RB1, and FOS, and multiple other targets in inflammation, immunity, and lipid metabolism.
format Online
Article
Text
id pubmed-10174355
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Lippincott Williams & Wilkins
record_format MEDLINE/PubMed
spelling pubmed-101743552023-05-12 Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review Zhang, Ning Zhang, Dandan Zhang, Qian Zhang, Ruisu Wang, Yan Medicine (Baltimore) 6300 Danggui Sini is a traditional Chinese medicine prescription for treating peripheral nerve injury (PNI). We studied the mechanisms of this decoction through network pharmacology analysis and molecular docking. Using R language and Perl software, the active components and predicted targets of Danggui Sini, as well as the related gene targets of PNI, were mined through TCMSP, GeneCards, OMIM, TTD, and DrugBank. The network diagram of active components and intersection targets was constructed using Cytoscape software and the STRING database. The CytoNCA plug-in was used to screen out the core compounds and key targets. The genes were analyzed for Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment. AutoDock was used to analyze the molecular docking of key targets and core compounds of diseases. The drug component disease target regulatory network showed that the key components included quercetin, kaempferol, naringenin, and licochalcone A, which play key roles in the whole network and may be the primary compounds associated with the action of Danggui Sini against PNI. PPI network topology analysis showed high degree values for RELA, JUN, MAPK1, RB1, and FOS. Enrichment analysis showed that the core targets of Danggui Sini participated in pathways associated with neurogenesis-multiple diseases. Molecular docking showed that the active ingredients in Danggui Sini had a good binding ability with key targets. We conclude that many active components of Danggui Sini play therapeutic roles in PNI treatment by regulating RELA, JUN, MAPK1, RB1, and FOS, and multiple other targets in inflammation, immunity, and lipid metabolism. Lippincott Williams & Wilkins 2023-05-12 /pmc/articles/PMC10174355/ /pubmed/37171334 http://dx.doi.org/10.1097/MD.0000000000033528 Text en Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY) (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle 6300
Zhang, Ning
Zhang, Dandan
Zhang, Qian
Zhang, Ruisu
Wang, Yan
Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review
title Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review
title_full Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review
title_fullStr Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review
title_full_unstemmed Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review
title_short Mechanism of Danggui Sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: A review
title_sort mechanism of danggui sini underlying the treatment of peripheral nerve injury based on network pharmacology and molecular docking: a review
topic 6300
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10174355/
https://www.ncbi.nlm.nih.gov/pubmed/37171334
http://dx.doi.org/10.1097/MD.0000000000033528
work_keys_str_mv AT zhangning mechanismofdangguisiniunderlyingthetreatmentofperipheralnerveinjurybasedonnetworkpharmacologyandmoleculardockingareview
AT zhangdandan mechanismofdangguisiniunderlyingthetreatmentofperipheralnerveinjurybasedonnetworkpharmacologyandmoleculardockingareview
AT zhangqian mechanismofdangguisiniunderlyingthetreatmentofperipheralnerveinjurybasedonnetworkpharmacologyandmoleculardockingareview
AT zhangruisu mechanismofdangguisiniunderlyingthetreatmentofperipheralnerveinjurybasedonnetworkpharmacologyandmoleculardockingareview
AT wangyan mechanismofdangguisiniunderlyingthetreatmentofperipheralnerveinjurybasedonnetworkpharmacologyandmoleculardockingareview