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Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia

The process of optimizing in vitro seed sterilization and germination is a complicated task since this process is influenced by interactions of many factors (e.g., genotype, disinfectants, pH of the media, temperature, light, immersion time). This study investigated the role of various types and con...

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Autores principales: Rezaei, Hamed, Mirzaie-asl, Asghar, Abdollahi, Mohammad Reza, Tohidfar, Masoud
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10174541/
https://www.ncbi.nlm.nih.gov/pubmed/37167278
http://dx.doi.org/10.1371/journal.pone.0285657
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author Rezaei, Hamed
Mirzaie-asl, Asghar
Abdollahi, Mohammad Reza
Tohidfar, Masoud
author_facet Rezaei, Hamed
Mirzaie-asl, Asghar
Abdollahi, Mohammad Reza
Tohidfar, Masoud
author_sort Rezaei, Hamed
collection PubMed
description The process of optimizing in vitro seed sterilization and germination is a complicated task since this process is influenced by interactions of many factors (e.g., genotype, disinfectants, pH of the media, temperature, light, immersion time). This study investigated the role of various types and concentrations of disinfectants (i.e., NaOCl, Ca(ClO)(2), HgCl(2), H(2)O(2), NWCN-Fe, MWCNT) as well as immersion time in successful in vitro seed sterilization and germination of petunia. Also, the utility of three artificial neural networks (ANNs) (e.g., multilayer perceptron (MLP), radial basis function (RBF), and generalized regression neural network (GRNN)) as modeling tools were evaluated to analyze the effect of disinfectants and immersion time on in vitro seed sterilization and germination. Moreover, non‑dominated sorting genetic algorithm‑II (NSGA‑II) was employed for optimizing the selected prediction model. The GRNN algorithm displayed superior predictive accuracy in comparison to MLP and RBF models. Also, the results showed that NSGA‑II can be considered as a reliable multi-objective optimization algorithm for finding the optimal level of disinfectants and immersion time to simultaneously minimize contamination rate and maximize germination percentage. Generally, GRNN-NSGA-II as an up-to-date and reliable computational tool can be applied in future plant in vitro culture studies.
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spelling pubmed-101745412023-05-12 Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia Rezaei, Hamed Mirzaie-asl, Asghar Abdollahi, Mohammad Reza Tohidfar, Masoud PLoS One Research Article The process of optimizing in vitro seed sterilization and germination is a complicated task since this process is influenced by interactions of many factors (e.g., genotype, disinfectants, pH of the media, temperature, light, immersion time). This study investigated the role of various types and concentrations of disinfectants (i.e., NaOCl, Ca(ClO)(2), HgCl(2), H(2)O(2), NWCN-Fe, MWCNT) as well as immersion time in successful in vitro seed sterilization and germination of petunia. Also, the utility of three artificial neural networks (ANNs) (e.g., multilayer perceptron (MLP), radial basis function (RBF), and generalized regression neural network (GRNN)) as modeling tools were evaluated to analyze the effect of disinfectants and immersion time on in vitro seed sterilization and germination. Moreover, non‑dominated sorting genetic algorithm‑II (NSGA‑II) was employed for optimizing the selected prediction model. The GRNN algorithm displayed superior predictive accuracy in comparison to MLP and RBF models. Also, the results showed that NSGA‑II can be considered as a reliable multi-objective optimization algorithm for finding the optimal level of disinfectants and immersion time to simultaneously minimize contamination rate and maximize germination percentage. Generally, GRNN-NSGA-II as an up-to-date and reliable computational tool can be applied in future plant in vitro culture studies. Public Library of Science 2023-05-11 /pmc/articles/PMC10174541/ /pubmed/37167278 http://dx.doi.org/10.1371/journal.pone.0285657 Text en © 2023 Rezaei et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Rezaei, Hamed
Mirzaie-asl, Asghar
Abdollahi, Mohammad Reza
Tohidfar, Masoud
Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia
title Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia
title_full Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia
title_fullStr Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia
title_full_unstemmed Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia
title_short Comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia
title_sort comparative analysis of different artificial neural networks for predicting and optimizing in vitro seed germination and sterilization of petunia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10174541/
https://www.ncbi.nlm.nih.gov/pubmed/37167278
http://dx.doi.org/10.1371/journal.pone.0285657
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