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Efficient keystone species identification strategy based on tabu search
As species extinction accelerates globally and biodiversity declines dramatically, identifying keystone species becomes an effective way to conserve biodiversity. In traditional approaches, it is considered that the extinction of species with high centrality poses the greatest threat to secondary ex...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10174581/ https://www.ncbi.nlm.nih.gov/pubmed/37167265 http://dx.doi.org/10.1371/journal.pone.0285575 |
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author | Fan, Chuanjin Zhu, Donghui Zhang, Tongtong Wu, Ruijia |
author_facet | Fan, Chuanjin Zhu, Donghui Zhang, Tongtong Wu, Ruijia |
author_sort | Fan, Chuanjin |
collection | PubMed |
description | As species extinction accelerates globally and biodiversity declines dramatically, identifying keystone species becomes an effective way to conserve biodiversity. In traditional approaches, it is considered that the extinction of species with high centrality poses the greatest threat to secondary extinction. However, the indirect effect, which is equally important as the local and direct effects, is not included. Here, we propose an optimized disintegration strategy model for quantitative food webs and introduced tabu search, a metaheuristic optimization algorithm, to identify keystone species. Topological simulations are used to record secondary extinctions during species removal and secondary extinction areas, as well as to evaluate food web robustness. The effectiveness of the proposed strategy is also validated by comparing it with traditional methods. Results of our experiments demonstrate that our strategy can optimize the effect of food web disintegration and identify the species whose extinction is most destructive to the food web through global search. The algorithm provides an innovative and efficient way for further development of keystone species identification in the ecosystem. |
format | Online Article Text |
id | pubmed-10174581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-101745812023-05-12 Efficient keystone species identification strategy based on tabu search Fan, Chuanjin Zhu, Donghui Zhang, Tongtong Wu, Ruijia PLoS One Research Article As species extinction accelerates globally and biodiversity declines dramatically, identifying keystone species becomes an effective way to conserve biodiversity. In traditional approaches, it is considered that the extinction of species with high centrality poses the greatest threat to secondary extinction. However, the indirect effect, which is equally important as the local and direct effects, is not included. Here, we propose an optimized disintegration strategy model for quantitative food webs and introduced tabu search, a metaheuristic optimization algorithm, to identify keystone species. Topological simulations are used to record secondary extinctions during species removal and secondary extinction areas, as well as to evaluate food web robustness. The effectiveness of the proposed strategy is also validated by comparing it with traditional methods. Results of our experiments demonstrate that our strategy can optimize the effect of food web disintegration and identify the species whose extinction is most destructive to the food web through global search. The algorithm provides an innovative and efficient way for further development of keystone species identification in the ecosystem. Public Library of Science 2023-05-11 /pmc/articles/PMC10174581/ /pubmed/37167265 http://dx.doi.org/10.1371/journal.pone.0285575 Text en © 2023 Fan et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Fan, Chuanjin Zhu, Donghui Zhang, Tongtong Wu, Ruijia Efficient keystone species identification strategy based on tabu search |
title | Efficient keystone species identification strategy based on tabu search |
title_full | Efficient keystone species identification strategy based on tabu search |
title_fullStr | Efficient keystone species identification strategy based on tabu search |
title_full_unstemmed | Efficient keystone species identification strategy based on tabu search |
title_short | Efficient keystone species identification strategy based on tabu search |
title_sort | efficient keystone species identification strategy based on tabu search |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10174581/ https://www.ncbi.nlm.nih.gov/pubmed/37167265 http://dx.doi.org/10.1371/journal.pone.0285575 |
work_keys_str_mv | AT fanchuanjin efficientkeystonespeciesidentificationstrategybasedontabusearch AT zhudonghui efficientkeystonespeciesidentificationstrategybasedontabusearch AT zhangtongtong efficientkeystonespeciesidentificationstrategybasedontabusearch AT wuruijia efficientkeystonespeciesidentificationstrategybasedontabusearch |