Cargando…

Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents

A smart artificial intelligent system (SAIS) for Acinetobacter density (AD) enumeration in waterbodies represents an invaluable strategy for avoidance of repetitive, laborious, and time-consuming routines associated with its determination. This study aimed to predict AD in waterbodies using machine...

Descripción completa

Detalles Bibliográficos
Autores principales: Ekundayo, Temitope C., Adewoyin, Mary A., Ijabadeniyi, Oluwatosin A., Igbinosa, Etinosa O., Okoh, Anthony I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177717/
https://www.ncbi.nlm.nih.gov/pubmed/37173379
http://dx.doi.org/10.1038/s41598-023-34963-6
_version_ 1785040692879294464
author Ekundayo, Temitope C.
Adewoyin, Mary A.
Ijabadeniyi, Oluwatosin A.
Igbinosa, Etinosa O.
Okoh, Anthony I.
author_facet Ekundayo, Temitope C.
Adewoyin, Mary A.
Ijabadeniyi, Oluwatosin A.
Igbinosa, Etinosa O.
Okoh, Anthony I.
author_sort Ekundayo, Temitope C.
collection PubMed
description A smart artificial intelligent system (SAIS) for Acinetobacter density (AD) enumeration in waterbodies represents an invaluable strategy for avoidance of repetitive, laborious, and time-consuming routines associated with its determination. This study aimed to predict AD in waterbodies using machine learning (ML). AD and physicochemical variables (PVs) data from three rivers monitored via standard protocols in a year-long study were fitted to 18 ML algorithms. The models’ performance was assayed using regression metrics. The average pH, EC, TDS, salinity, temperature, TSS, TBS, DO, BOD, and AD was 7.76 ± 0.02, 218.66 ± 4.76 µS/cm, 110.53 ± 2.36 mg/L, 0.10 ± 0.00 PSU, 17.29 ± 0.21 °C, 80.17 ± 5.09 mg/L, 87.51 ± 5.41 NTU, 8.82 ± 0.04 mg/L, 4.00 ± 0.10 mg/L, and 3.19 ± 0.03 log CFU/100 mL respectively. While the contributions of PVs differed in values, AD predicted value by XGB [3.1792 (1.1040–4.5828)] and Cubist [3.1736 (1.1012–4.5300)] outshined other algorithms. Also, XGB (MSE = 0.0059, RMSE = 0.0770; R(2) = 0.9912; MAD = 0.0440) and Cubist (MSE = 0.0117, RMSE = 0.1081, R(2) = 0.9827; MAD = 0.0437) ranked first and second respectively, in predicting AD. Temperature was the most important feature in predicting AD and ranked first by 10/18 ML-algorithms accounting for 43.00–83.30% mean dropout RMSE loss after 1000 permutations. The two models' partial dependence and residual diagnostics sensitivity revealed their efficient AD prognosticating accuracies in waterbodies. In conclusion, a fully developed XGB/Cubist/XGB-Cubist ensemble/web SAIS app for AD monitoring in waterbodies could be deployed to shorten turnaround time in deciding microbiological quality of waterbodies for irrigation and other purposes.
format Online
Article
Text
id pubmed-10177717
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-101777172023-05-14 Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents Ekundayo, Temitope C. Adewoyin, Mary A. Ijabadeniyi, Oluwatosin A. Igbinosa, Etinosa O. Okoh, Anthony I. Sci Rep Article A smart artificial intelligent system (SAIS) for Acinetobacter density (AD) enumeration in waterbodies represents an invaluable strategy for avoidance of repetitive, laborious, and time-consuming routines associated with its determination. This study aimed to predict AD in waterbodies using machine learning (ML). AD and physicochemical variables (PVs) data from three rivers monitored via standard protocols in a year-long study were fitted to 18 ML algorithms. The models’ performance was assayed using regression metrics. The average pH, EC, TDS, salinity, temperature, TSS, TBS, DO, BOD, and AD was 7.76 ± 0.02, 218.66 ± 4.76 µS/cm, 110.53 ± 2.36 mg/L, 0.10 ± 0.00 PSU, 17.29 ± 0.21 °C, 80.17 ± 5.09 mg/L, 87.51 ± 5.41 NTU, 8.82 ± 0.04 mg/L, 4.00 ± 0.10 mg/L, and 3.19 ± 0.03 log CFU/100 mL respectively. While the contributions of PVs differed in values, AD predicted value by XGB [3.1792 (1.1040–4.5828)] and Cubist [3.1736 (1.1012–4.5300)] outshined other algorithms. Also, XGB (MSE = 0.0059, RMSE = 0.0770; R(2) = 0.9912; MAD = 0.0440) and Cubist (MSE = 0.0117, RMSE = 0.1081, R(2) = 0.9827; MAD = 0.0437) ranked first and second respectively, in predicting AD. Temperature was the most important feature in predicting AD and ranked first by 10/18 ML-algorithms accounting for 43.00–83.30% mean dropout RMSE loss after 1000 permutations. The two models' partial dependence and residual diagnostics sensitivity revealed their efficient AD prognosticating accuracies in waterbodies. In conclusion, a fully developed XGB/Cubist/XGB-Cubist ensemble/web SAIS app for AD monitoring in waterbodies could be deployed to shorten turnaround time in deciding microbiological quality of waterbodies for irrigation and other purposes. Nature Publishing Group UK 2023-05-12 /pmc/articles/PMC10177717/ /pubmed/37173379 http://dx.doi.org/10.1038/s41598-023-34963-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ekundayo, Temitope C.
Adewoyin, Mary A.
Ijabadeniyi, Oluwatosin A.
Igbinosa, Etinosa O.
Okoh, Anthony I.
Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
title Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
title_full Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
title_fullStr Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
title_full_unstemmed Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
title_short Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
title_sort machine learning-guided determination of acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177717/
https://www.ncbi.nlm.nih.gov/pubmed/37173379
http://dx.doi.org/10.1038/s41598-023-34963-6
work_keys_str_mv AT ekundayotemitopec machinelearningguideddeterminationofacinetobacterdensityinwaterbodiesreceivingmunicipalandhospitalwastewatereffluents
AT adewoyinmarya machinelearningguideddeterminationofacinetobacterdensityinwaterbodiesreceivingmunicipalandhospitalwastewatereffluents
AT ijabadeniyioluwatosina machinelearningguideddeterminationofacinetobacterdensityinwaterbodiesreceivingmunicipalandhospitalwastewatereffluents
AT igbinosaetinosao machinelearningguideddeterminationofacinetobacterdensityinwaterbodiesreceivingmunicipalandhospitalwastewatereffluents
AT okohanthonyi machinelearningguideddeterminationofacinetobacterdensityinwaterbodiesreceivingmunicipalandhospitalwastewatereffluents