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Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
A smart artificial intelligent system (SAIS) for Acinetobacter density (AD) enumeration in waterbodies represents an invaluable strategy for avoidance of repetitive, laborious, and time-consuming routines associated with its determination. This study aimed to predict AD in waterbodies using machine...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177717/ https://www.ncbi.nlm.nih.gov/pubmed/37173379 http://dx.doi.org/10.1038/s41598-023-34963-6 |
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author | Ekundayo, Temitope C. Adewoyin, Mary A. Ijabadeniyi, Oluwatosin A. Igbinosa, Etinosa O. Okoh, Anthony I. |
author_facet | Ekundayo, Temitope C. Adewoyin, Mary A. Ijabadeniyi, Oluwatosin A. Igbinosa, Etinosa O. Okoh, Anthony I. |
author_sort | Ekundayo, Temitope C. |
collection | PubMed |
description | A smart artificial intelligent system (SAIS) for Acinetobacter density (AD) enumeration in waterbodies represents an invaluable strategy for avoidance of repetitive, laborious, and time-consuming routines associated with its determination. This study aimed to predict AD in waterbodies using machine learning (ML). AD and physicochemical variables (PVs) data from three rivers monitored via standard protocols in a year-long study were fitted to 18 ML algorithms. The models’ performance was assayed using regression metrics. The average pH, EC, TDS, salinity, temperature, TSS, TBS, DO, BOD, and AD was 7.76 ± 0.02, 218.66 ± 4.76 µS/cm, 110.53 ± 2.36 mg/L, 0.10 ± 0.00 PSU, 17.29 ± 0.21 °C, 80.17 ± 5.09 mg/L, 87.51 ± 5.41 NTU, 8.82 ± 0.04 mg/L, 4.00 ± 0.10 mg/L, and 3.19 ± 0.03 log CFU/100 mL respectively. While the contributions of PVs differed in values, AD predicted value by XGB [3.1792 (1.1040–4.5828)] and Cubist [3.1736 (1.1012–4.5300)] outshined other algorithms. Also, XGB (MSE = 0.0059, RMSE = 0.0770; R(2) = 0.9912; MAD = 0.0440) and Cubist (MSE = 0.0117, RMSE = 0.1081, R(2) = 0.9827; MAD = 0.0437) ranked first and second respectively, in predicting AD. Temperature was the most important feature in predicting AD and ranked first by 10/18 ML-algorithms accounting for 43.00–83.30% mean dropout RMSE loss after 1000 permutations. The two models' partial dependence and residual diagnostics sensitivity revealed their efficient AD prognosticating accuracies in waterbodies. In conclusion, a fully developed XGB/Cubist/XGB-Cubist ensemble/web SAIS app for AD monitoring in waterbodies could be deployed to shorten turnaround time in deciding microbiological quality of waterbodies for irrigation and other purposes. |
format | Online Article Text |
id | pubmed-10177717 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-101777172023-05-14 Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents Ekundayo, Temitope C. Adewoyin, Mary A. Ijabadeniyi, Oluwatosin A. Igbinosa, Etinosa O. Okoh, Anthony I. Sci Rep Article A smart artificial intelligent system (SAIS) for Acinetobacter density (AD) enumeration in waterbodies represents an invaluable strategy for avoidance of repetitive, laborious, and time-consuming routines associated with its determination. This study aimed to predict AD in waterbodies using machine learning (ML). AD and physicochemical variables (PVs) data from three rivers monitored via standard protocols in a year-long study were fitted to 18 ML algorithms. The models’ performance was assayed using regression metrics. The average pH, EC, TDS, salinity, temperature, TSS, TBS, DO, BOD, and AD was 7.76 ± 0.02, 218.66 ± 4.76 µS/cm, 110.53 ± 2.36 mg/L, 0.10 ± 0.00 PSU, 17.29 ± 0.21 °C, 80.17 ± 5.09 mg/L, 87.51 ± 5.41 NTU, 8.82 ± 0.04 mg/L, 4.00 ± 0.10 mg/L, and 3.19 ± 0.03 log CFU/100 mL respectively. While the contributions of PVs differed in values, AD predicted value by XGB [3.1792 (1.1040–4.5828)] and Cubist [3.1736 (1.1012–4.5300)] outshined other algorithms. Also, XGB (MSE = 0.0059, RMSE = 0.0770; R(2) = 0.9912; MAD = 0.0440) and Cubist (MSE = 0.0117, RMSE = 0.1081, R(2) = 0.9827; MAD = 0.0437) ranked first and second respectively, in predicting AD. Temperature was the most important feature in predicting AD and ranked first by 10/18 ML-algorithms accounting for 43.00–83.30% mean dropout RMSE loss after 1000 permutations. The two models' partial dependence and residual diagnostics sensitivity revealed their efficient AD prognosticating accuracies in waterbodies. In conclusion, a fully developed XGB/Cubist/XGB-Cubist ensemble/web SAIS app for AD monitoring in waterbodies could be deployed to shorten turnaround time in deciding microbiological quality of waterbodies for irrigation and other purposes. Nature Publishing Group UK 2023-05-12 /pmc/articles/PMC10177717/ /pubmed/37173379 http://dx.doi.org/10.1038/s41598-023-34963-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ekundayo, Temitope C. Adewoyin, Mary A. Ijabadeniyi, Oluwatosin A. Igbinosa, Etinosa O. Okoh, Anthony I. Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents |
title | Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents |
title_full | Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents |
title_fullStr | Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents |
title_full_unstemmed | Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents |
title_short | Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents |
title_sort | machine learning-guided determination of acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177717/ https://www.ncbi.nlm.nih.gov/pubmed/37173379 http://dx.doi.org/10.1038/s41598-023-34963-6 |
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