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AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans
The mechanistic target of rapamycin (mTOR) kinase is one of the top drug targets for promoting health and lifespan extension. Besides rapamycin, only a few other mTOR inhibitors have been developed and shown to be capable of slowing aging. We used machine learning to predict novel small molecules ta...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177929/ https://www.ncbi.nlm.nih.gov/pubmed/37175557 http://dx.doi.org/10.3390/ijms24097850 |
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author | Vidovic, Tinka Dakhovnik, Alexander Hrabovskyi, Oleksii MacArthur, Michael R. Ewald, Collin Y. |
author_facet | Vidovic, Tinka Dakhovnik, Alexander Hrabovskyi, Oleksii MacArthur, Michael R. Ewald, Collin Y. |
author_sort | Vidovic, Tinka |
collection | PubMed |
description | The mechanistic target of rapamycin (mTOR) kinase is one of the top drug targets for promoting health and lifespan extension. Besides rapamycin, only a few other mTOR inhibitors have been developed and shown to be capable of slowing aging. We used machine learning to predict novel small molecules targeting mTOR. We selected one small molecule, TKA001, based on in silico predictions of a high on-target probability, low toxicity, favorable physicochemical properties, and preferable ADMET profile. We modeled TKA001 binding in silico by molecular docking and molecular dynamics. TKA001 potently inhibits both TOR complex 1 and 2 signaling in vitro. Furthermore, TKA001 inhibits human cancer cell proliferation in vitro and extends the lifespan of Caenorhabditis elegans, suggesting that TKA001 is able to slow aging in vivo. |
format | Online Article Text |
id | pubmed-10177929 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101779292023-05-13 AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans Vidovic, Tinka Dakhovnik, Alexander Hrabovskyi, Oleksii MacArthur, Michael R. Ewald, Collin Y. Int J Mol Sci Communication The mechanistic target of rapamycin (mTOR) kinase is one of the top drug targets for promoting health and lifespan extension. Besides rapamycin, only a few other mTOR inhibitors have been developed and shown to be capable of slowing aging. We used machine learning to predict novel small molecules targeting mTOR. We selected one small molecule, TKA001, based on in silico predictions of a high on-target probability, low toxicity, favorable physicochemical properties, and preferable ADMET profile. We modeled TKA001 binding in silico by molecular docking and molecular dynamics. TKA001 potently inhibits both TOR complex 1 and 2 signaling in vitro. Furthermore, TKA001 inhibits human cancer cell proliferation in vitro and extends the lifespan of Caenorhabditis elegans, suggesting that TKA001 is able to slow aging in vivo. MDPI 2023-04-25 /pmc/articles/PMC10177929/ /pubmed/37175557 http://dx.doi.org/10.3390/ijms24097850 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Vidovic, Tinka Dakhovnik, Alexander Hrabovskyi, Oleksii MacArthur, Michael R. Ewald, Collin Y. AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans |
title | AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans |
title_full | AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans |
title_fullStr | AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans |
title_full_unstemmed | AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans |
title_short | AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans |
title_sort | ai-predicted mtor inhibitor reduces cancer cell proliferation and extends the lifespan of c. elegans |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177929/ https://www.ncbi.nlm.nih.gov/pubmed/37175557 http://dx.doi.org/10.3390/ijms24097850 |
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