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AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans

The mechanistic target of rapamycin (mTOR) kinase is one of the top drug targets for promoting health and lifespan extension. Besides rapamycin, only a few other mTOR inhibitors have been developed and shown to be capable of slowing aging. We used machine learning to predict novel small molecules ta...

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Autores principales: Vidovic, Tinka, Dakhovnik, Alexander, Hrabovskyi, Oleksii, MacArthur, Michael R., Ewald, Collin Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177929/
https://www.ncbi.nlm.nih.gov/pubmed/37175557
http://dx.doi.org/10.3390/ijms24097850
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author Vidovic, Tinka
Dakhovnik, Alexander
Hrabovskyi, Oleksii
MacArthur, Michael R.
Ewald, Collin Y.
author_facet Vidovic, Tinka
Dakhovnik, Alexander
Hrabovskyi, Oleksii
MacArthur, Michael R.
Ewald, Collin Y.
author_sort Vidovic, Tinka
collection PubMed
description The mechanistic target of rapamycin (mTOR) kinase is one of the top drug targets for promoting health and lifespan extension. Besides rapamycin, only a few other mTOR inhibitors have been developed and shown to be capable of slowing aging. We used machine learning to predict novel small molecules targeting mTOR. We selected one small molecule, TKA001, based on in silico predictions of a high on-target probability, low toxicity, favorable physicochemical properties, and preferable ADMET profile. We modeled TKA001 binding in silico by molecular docking and molecular dynamics. TKA001 potently inhibits both TOR complex 1 and 2 signaling in vitro. Furthermore, TKA001 inhibits human cancer cell proliferation in vitro and extends the lifespan of Caenorhabditis elegans, suggesting that TKA001 is able to slow aging in vivo.
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spelling pubmed-101779292023-05-13 AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans Vidovic, Tinka Dakhovnik, Alexander Hrabovskyi, Oleksii MacArthur, Michael R. Ewald, Collin Y. Int J Mol Sci Communication The mechanistic target of rapamycin (mTOR) kinase is one of the top drug targets for promoting health and lifespan extension. Besides rapamycin, only a few other mTOR inhibitors have been developed and shown to be capable of slowing aging. We used machine learning to predict novel small molecules targeting mTOR. We selected one small molecule, TKA001, based on in silico predictions of a high on-target probability, low toxicity, favorable physicochemical properties, and preferable ADMET profile. We modeled TKA001 binding in silico by molecular docking and molecular dynamics. TKA001 potently inhibits both TOR complex 1 and 2 signaling in vitro. Furthermore, TKA001 inhibits human cancer cell proliferation in vitro and extends the lifespan of Caenorhabditis elegans, suggesting that TKA001 is able to slow aging in vivo. MDPI 2023-04-25 /pmc/articles/PMC10177929/ /pubmed/37175557 http://dx.doi.org/10.3390/ijms24097850 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Vidovic, Tinka
Dakhovnik, Alexander
Hrabovskyi, Oleksii
MacArthur, Michael R.
Ewald, Collin Y.
AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans
title AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans
title_full AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans
title_fullStr AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans
title_full_unstemmed AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans
title_short AI-Predicted mTOR Inhibitor Reduces Cancer Cell Proliferation and Extends the Lifespan of C. elegans
title_sort ai-predicted mtor inhibitor reduces cancer cell proliferation and extends the lifespan of c. elegans
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177929/
https://www.ncbi.nlm.nih.gov/pubmed/37175557
http://dx.doi.org/10.3390/ijms24097850
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