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Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center

The set of TX(3)-TrX(2) (T = C, Si, Ge; Tr = B, Al, Ga; X = F, Cl, Br) molecules offers a rather unique opportunity to study both σ-hole and π-hole dimerization on the tetrel and triel ends, respectively. According to the molecular electrostatic potential (MEP) distribution, the π-hole extrema (acid...

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Autores principales: Michalczyk, Mariusz, Wojtkowiak, Kamil, Panek, Jarosław J., Jezierska, Aneta, Zierkiewicz, Wiktor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177972/
https://www.ncbi.nlm.nih.gov/pubmed/37175586
http://dx.doi.org/10.3390/ijms24097881
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author Michalczyk, Mariusz
Wojtkowiak, Kamil
Panek, Jarosław J.
Jezierska, Aneta
Zierkiewicz, Wiktor
author_facet Michalczyk, Mariusz
Wojtkowiak, Kamil
Panek, Jarosław J.
Jezierska, Aneta
Zierkiewicz, Wiktor
author_sort Michalczyk, Mariusz
collection PubMed
description The set of TX(3)-TrX(2) (T = C, Si, Ge; Tr = B, Al, Ga; X = F, Cl, Br) molecules offers a rather unique opportunity to study both σ-hole and π-hole dimerization on the tetrel and triel ends, respectively. According to the molecular electrostatic potential (MEP) distribution, the π-hole extrema (acidic sites) were more intense than their σ-hole counterparts. The molecules owning the most (CX(3)-AlX(2)) and least (SiX(3)-BX(2)) intense π-holes were chosen to evaluate their capacities to attract one and two HCN molecules (Lewis bases). We discovered that the energetic characteristics of π-hole dimers severely conflict with the monomers MEP pattern since the weakest π-hole monomer forms a dimer characterized by interaction energy compared to those created by the monomers with noticeably greater power in the π-hole region. This outcome is due to the deformation of the weakest π-hole donor. Furthermore, the MEP analysis for monomers in the geometry of respective dimers revealed a “residual π-hole” site that was able to drive second ligand attachment, giving rise to the two “unusual trimers” examined further by the NCI and QTAIM analyses. Apart from them, the π-hole/π-hole and σ-hole/π-hole trimers have also been obtained throughout this study and described using energetic and geometric parameters. The SAPT approach revealed details of the bonding in one of the “unusual trimers”. Finally, Born-Oppenheimer Molecular Dynamics (BOMD) simulations were carried out to investigate the time evolution of the interatomic distances of the studied complexes as well as their stability.
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spelling pubmed-101779722023-05-13 Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center Michalczyk, Mariusz Wojtkowiak, Kamil Panek, Jarosław J. Jezierska, Aneta Zierkiewicz, Wiktor Int J Mol Sci Article The set of TX(3)-TrX(2) (T = C, Si, Ge; Tr = B, Al, Ga; X = F, Cl, Br) molecules offers a rather unique opportunity to study both σ-hole and π-hole dimerization on the tetrel and triel ends, respectively. According to the molecular electrostatic potential (MEP) distribution, the π-hole extrema (acidic sites) were more intense than their σ-hole counterparts. The molecules owning the most (CX(3)-AlX(2)) and least (SiX(3)-BX(2)) intense π-holes were chosen to evaluate their capacities to attract one and two HCN molecules (Lewis bases). We discovered that the energetic characteristics of π-hole dimers severely conflict with the monomers MEP pattern since the weakest π-hole monomer forms a dimer characterized by interaction energy compared to those created by the monomers with noticeably greater power in the π-hole region. This outcome is due to the deformation of the weakest π-hole donor. Furthermore, the MEP analysis for monomers in the geometry of respective dimers revealed a “residual π-hole” site that was able to drive second ligand attachment, giving rise to the two “unusual trimers” examined further by the NCI and QTAIM analyses. Apart from them, the π-hole/π-hole and σ-hole/π-hole trimers have also been obtained throughout this study and described using energetic and geometric parameters. The SAPT approach revealed details of the bonding in one of the “unusual trimers”. Finally, Born-Oppenheimer Molecular Dynamics (BOMD) simulations were carried out to investigate the time evolution of the interatomic distances of the studied complexes as well as their stability. MDPI 2023-04-26 /pmc/articles/PMC10177972/ /pubmed/37175586 http://dx.doi.org/10.3390/ijms24097881 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Michalczyk, Mariusz
Wojtkowiak, Kamil
Panek, Jarosław J.
Jezierska, Aneta
Zierkiewicz, Wiktor
Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center
title Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center
title_full Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center
title_fullStr Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center
title_full_unstemmed Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center
title_short Static and Dynamical Quantum Studies of CX(3)-AlX(2) and CSiX(3)-BX(2) (X = F, Cl, Br) Complexes with Hydrocyanic Acid: Unusual Behavior of Strong π-Hole at Triel Center
title_sort static and dynamical quantum studies of cx(3)-alx(2) and csix(3)-bx(2) (x = f, cl, br) complexes with hydrocyanic acid: unusual behavior of strong π-hole at triel center
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10177972/
https://www.ncbi.nlm.nih.gov/pubmed/37175586
http://dx.doi.org/10.3390/ijms24097881
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