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Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle

Myostatin (MSTN), a growth and differentiation factor, plays an important role in regulating skeletal muscle growth and development. MSTN knockout (MSTN-KO) leads to skeletal muscle hypertrophy and regulates metabolic homeostasis. Moreover, MSTN is also detected in smooth muscle. However, the effect...

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Autores principales: Gu, Mingjuan, Wang, Song, Di, Anqi, Wu, Di, Hai, Chao, Liu, Xuefei, Bai, Chunling, Su, Guanghua, Yang, Lei, Li, Guangpeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10178895/
https://www.ncbi.nlm.nih.gov/pubmed/37175828
http://dx.doi.org/10.3390/ijms24098120
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author Gu, Mingjuan
Wang, Song
Di, Anqi
Wu, Di
Hai, Chao
Liu, Xuefei
Bai, Chunling
Su, Guanghua
Yang, Lei
Li, Guangpeng
author_facet Gu, Mingjuan
Wang, Song
Di, Anqi
Wu, Di
Hai, Chao
Liu, Xuefei
Bai, Chunling
Su, Guanghua
Yang, Lei
Li, Guangpeng
author_sort Gu, Mingjuan
collection PubMed
description Myostatin (MSTN), a growth and differentiation factor, plays an important role in regulating skeletal muscle growth and development. MSTN knockout (MSTN-KO) leads to skeletal muscle hypertrophy and regulates metabolic homeostasis. Moreover, MSTN is also detected in smooth muscle. However, the effect of MSTN-KO on smooth muscle has not yet been reported. In this study, combined metabolome and transcriptome analyses were performed to investigate the metabolic and transcriptional profiling in esophageal smooth muscles of MSTN-KO Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 608.5 ± 17.62 kg) and wild-type (WT) Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 528.25 ± 11.03 kg). The transcriptome was sequenced using the Illumina Novaseq™ 6000 sequence platform. In total, 337 significantly up- and 129 significantly down-regulated genes were detected in the MSTN-KO cattle compared with the WT Chinese Luxi Yellow cattle. Functional enrichment analysis indicated that the DEGs were mainly enriched in 67 signaling pathways, including cell adhesion molecules, tight junction, and the cGMP-PKG signaling pathway. Metabolomics analysis by liquid chromatography-tandem mass spectrometry (LC-MS/MS) identified 130 differential metabolites between the groups, with 56 up-regulated and 74 down-regulated in MSTN knockout cattle compared with WT cattle. Differential metabolites were significantly enriched in 31 pathways, including glycerophospholipid metabolism, histidine metabolism, glutathione metabolism, and purine metabolism. Transcriptome and metabolome were combined to analyze the significant enrichment pathways, and there were three metabolically related pathways, including histidine metabolism, purine metabolism, and arginine and proline metabolism. These results provide important references for in-depth research on the effect of MSTN knockout on smooth muscle.
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spelling pubmed-101788952023-05-13 Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle Gu, Mingjuan Wang, Song Di, Anqi Wu, Di Hai, Chao Liu, Xuefei Bai, Chunling Su, Guanghua Yang, Lei Li, Guangpeng Int J Mol Sci Article Myostatin (MSTN), a growth and differentiation factor, plays an important role in regulating skeletal muscle growth and development. MSTN knockout (MSTN-KO) leads to skeletal muscle hypertrophy and regulates metabolic homeostasis. Moreover, MSTN is also detected in smooth muscle. However, the effect of MSTN-KO on smooth muscle has not yet been reported. In this study, combined metabolome and transcriptome analyses were performed to investigate the metabolic and transcriptional profiling in esophageal smooth muscles of MSTN-KO Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 608.5 ± 17.62 kg) and wild-type (WT) Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 528.25 ± 11.03 kg). The transcriptome was sequenced using the Illumina Novaseq™ 6000 sequence platform. In total, 337 significantly up- and 129 significantly down-regulated genes were detected in the MSTN-KO cattle compared with the WT Chinese Luxi Yellow cattle. Functional enrichment analysis indicated that the DEGs were mainly enriched in 67 signaling pathways, including cell adhesion molecules, tight junction, and the cGMP-PKG signaling pathway. Metabolomics analysis by liquid chromatography-tandem mass spectrometry (LC-MS/MS) identified 130 differential metabolites between the groups, with 56 up-regulated and 74 down-regulated in MSTN knockout cattle compared with WT cattle. Differential metabolites were significantly enriched in 31 pathways, including glycerophospholipid metabolism, histidine metabolism, glutathione metabolism, and purine metabolism. Transcriptome and metabolome were combined to analyze the significant enrichment pathways, and there were three metabolically related pathways, including histidine metabolism, purine metabolism, and arginine and proline metabolism. These results provide important references for in-depth research on the effect of MSTN knockout on smooth muscle. MDPI 2023-05-01 /pmc/articles/PMC10178895/ /pubmed/37175828 http://dx.doi.org/10.3390/ijms24098120 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gu, Mingjuan
Wang, Song
Di, Anqi
Wu, Di
Hai, Chao
Liu, Xuefei
Bai, Chunling
Su, Guanghua
Yang, Lei
Li, Guangpeng
Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle
title Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle
title_full Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle
title_fullStr Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle
title_full_unstemmed Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle
title_short Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle
title_sort combined transcriptome and metabolome analysis of smooth muscle of myostatin knockout cattle
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10178895/
https://www.ncbi.nlm.nih.gov/pubmed/37175828
http://dx.doi.org/10.3390/ijms24098120
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