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Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle
Myostatin (MSTN), a growth and differentiation factor, plays an important role in regulating skeletal muscle growth and development. MSTN knockout (MSTN-KO) leads to skeletal muscle hypertrophy and regulates metabolic homeostasis. Moreover, MSTN is also detected in smooth muscle. However, the effect...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10178895/ https://www.ncbi.nlm.nih.gov/pubmed/37175828 http://dx.doi.org/10.3390/ijms24098120 |
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author | Gu, Mingjuan Wang, Song Di, Anqi Wu, Di Hai, Chao Liu, Xuefei Bai, Chunling Su, Guanghua Yang, Lei Li, Guangpeng |
author_facet | Gu, Mingjuan Wang, Song Di, Anqi Wu, Di Hai, Chao Liu, Xuefei Bai, Chunling Su, Guanghua Yang, Lei Li, Guangpeng |
author_sort | Gu, Mingjuan |
collection | PubMed |
description | Myostatin (MSTN), a growth and differentiation factor, plays an important role in regulating skeletal muscle growth and development. MSTN knockout (MSTN-KO) leads to skeletal muscle hypertrophy and regulates metabolic homeostasis. Moreover, MSTN is also detected in smooth muscle. However, the effect of MSTN-KO on smooth muscle has not yet been reported. In this study, combined metabolome and transcriptome analyses were performed to investigate the metabolic and transcriptional profiling in esophageal smooth muscles of MSTN-KO Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 608.5 ± 17.62 kg) and wild-type (WT) Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 528.25 ± 11.03 kg). The transcriptome was sequenced using the Illumina Novaseq™ 6000 sequence platform. In total, 337 significantly up- and 129 significantly down-regulated genes were detected in the MSTN-KO cattle compared with the WT Chinese Luxi Yellow cattle. Functional enrichment analysis indicated that the DEGs were mainly enriched in 67 signaling pathways, including cell adhesion molecules, tight junction, and the cGMP-PKG signaling pathway. Metabolomics analysis by liquid chromatography-tandem mass spectrometry (LC-MS/MS) identified 130 differential metabolites between the groups, with 56 up-regulated and 74 down-regulated in MSTN knockout cattle compared with WT cattle. Differential metabolites were significantly enriched in 31 pathways, including glycerophospholipid metabolism, histidine metabolism, glutathione metabolism, and purine metabolism. Transcriptome and metabolome were combined to analyze the significant enrichment pathways, and there were three metabolically related pathways, including histidine metabolism, purine metabolism, and arginine and proline metabolism. These results provide important references for in-depth research on the effect of MSTN knockout on smooth muscle. |
format | Online Article Text |
id | pubmed-10178895 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-101788952023-05-13 Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle Gu, Mingjuan Wang, Song Di, Anqi Wu, Di Hai, Chao Liu, Xuefei Bai, Chunling Su, Guanghua Yang, Lei Li, Guangpeng Int J Mol Sci Article Myostatin (MSTN), a growth and differentiation factor, plays an important role in regulating skeletal muscle growth and development. MSTN knockout (MSTN-KO) leads to skeletal muscle hypertrophy and regulates metabolic homeostasis. Moreover, MSTN is also detected in smooth muscle. However, the effect of MSTN-KO on smooth muscle has not yet been reported. In this study, combined metabolome and transcriptome analyses were performed to investigate the metabolic and transcriptional profiling in esophageal smooth muscles of MSTN-KO Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 608.5 ± 17.62 kg) and wild-type (WT) Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 528.25 ± 11.03 kg). The transcriptome was sequenced using the Illumina Novaseq™ 6000 sequence platform. In total, 337 significantly up- and 129 significantly down-regulated genes were detected in the MSTN-KO cattle compared with the WT Chinese Luxi Yellow cattle. Functional enrichment analysis indicated that the DEGs were mainly enriched in 67 signaling pathways, including cell adhesion molecules, tight junction, and the cGMP-PKG signaling pathway. Metabolomics analysis by liquid chromatography-tandem mass spectrometry (LC-MS/MS) identified 130 differential metabolites between the groups, with 56 up-regulated and 74 down-regulated in MSTN knockout cattle compared with WT cattle. Differential metabolites were significantly enriched in 31 pathways, including glycerophospholipid metabolism, histidine metabolism, glutathione metabolism, and purine metabolism. Transcriptome and metabolome were combined to analyze the significant enrichment pathways, and there were three metabolically related pathways, including histidine metabolism, purine metabolism, and arginine and proline metabolism. These results provide important references for in-depth research on the effect of MSTN knockout on smooth muscle. MDPI 2023-05-01 /pmc/articles/PMC10178895/ /pubmed/37175828 http://dx.doi.org/10.3390/ijms24098120 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gu, Mingjuan Wang, Song Di, Anqi Wu, Di Hai, Chao Liu, Xuefei Bai, Chunling Su, Guanghua Yang, Lei Li, Guangpeng Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle |
title | Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle |
title_full | Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle |
title_fullStr | Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle |
title_full_unstemmed | Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle |
title_short | Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle |
title_sort | combined transcriptome and metabolome analysis of smooth muscle of myostatin knockout cattle |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10178895/ https://www.ncbi.nlm.nih.gov/pubmed/37175828 http://dx.doi.org/10.3390/ijms24098120 |
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