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Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk

Cardiovascular disease remains a leading cause of mortality with an estimated half a billion people affected in 2019. However, detecting signals between specific pathophysiology and coronary plaque phenotypes using complex multi-omic discovery datasets remains challenging due to the diversity of ind...

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Detalles Bibliográficos
Autores principales: Chan, Adam S., Wu, Songhua, Vernon, Stephen T., Tang, Owen, Figtree, Gemma A., Liu, Tongliang, Yang, Jean Y.H., Patrick, Ellis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10182278/
https://www.ncbi.nlm.nih.gov/pubmed/37192969
http://dx.doi.org/10.1016/j.isci.2023.106633
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author Chan, Adam S.
Wu, Songhua
Vernon, Stephen T.
Tang, Owen
Figtree, Gemma A.
Liu, Tongliang
Yang, Jean Y.H.
Patrick, Ellis
author_facet Chan, Adam S.
Wu, Songhua
Vernon, Stephen T.
Tang, Owen
Figtree, Gemma A.
Liu, Tongliang
Yang, Jean Y.H.
Patrick, Ellis
author_sort Chan, Adam S.
collection PubMed
description Cardiovascular disease remains a leading cause of mortality with an estimated half a billion people affected in 2019. However, detecting signals between specific pathophysiology and coronary plaque phenotypes using complex multi-omic discovery datasets remains challenging due to the diversity of individuals and their risk factors. Given the complex cohort heterogeneity present in those with coronary artery disease (CAD), we illustrate several different methods, both knowledge-guided and data-driven approaches, for identifying subcohorts of individuals with subclinical CAD and distinct metabolomic signatures. We then demonstrate that utilizing these subcohorts can improve the prediction of subclinical CAD and can facilitate the discovery of novel biomarkers of subclinical disease. Analyses acknowledging cohort heterogeneity through identifying and utilizing these subcohorts may be able to advance our understanding of CVD and provide more effective preventative treatments to reduce the burden of this disease in individuals and in society as a whole.
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spelling pubmed-101822782023-05-14 Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk Chan, Adam S. Wu, Songhua Vernon, Stephen T. Tang, Owen Figtree, Gemma A. Liu, Tongliang Yang, Jean Y.H. Patrick, Ellis iScience Article Cardiovascular disease remains a leading cause of mortality with an estimated half a billion people affected in 2019. However, detecting signals between specific pathophysiology and coronary plaque phenotypes using complex multi-omic discovery datasets remains challenging due to the diversity of individuals and their risk factors. Given the complex cohort heterogeneity present in those with coronary artery disease (CAD), we illustrate several different methods, both knowledge-guided and data-driven approaches, for identifying subcohorts of individuals with subclinical CAD and distinct metabolomic signatures. We then demonstrate that utilizing these subcohorts can improve the prediction of subclinical CAD and can facilitate the discovery of novel biomarkers of subclinical disease. Analyses acknowledging cohort heterogeneity through identifying and utilizing these subcohorts may be able to advance our understanding of CVD and provide more effective preventative treatments to reduce the burden of this disease in individuals and in society as a whole. Elsevier 2023-04-11 /pmc/articles/PMC10182278/ /pubmed/37192969 http://dx.doi.org/10.1016/j.isci.2023.106633 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Chan, Adam S.
Wu, Songhua
Vernon, Stephen T.
Tang, Owen
Figtree, Gemma A.
Liu, Tongliang
Yang, Jean Y.H.
Patrick, Ellis
Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk
title Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk
title_full Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk
title_fullStr Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk
title_full_unstemmed Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk
title_short Overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk
title_sort overcoming cohort heterogeneity for the prediction of subclinical cardiovascular disease risk
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10182278/
https://www.ncbi.nlm.nih.gov/pubmed/37192969
http://dx.doi.org/10.1016/j.isci.2023.106633
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