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A synthetic population-level oscillator in non-microfluidic environments

Synthetic oscillators have become a research hotspot because of their complexity and importance. The construction and stable operation of oscillators in large-scale environments are important and challenging. Here, we introduce a synthetic population-level oscillator in Escherichia coli that operate...

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Autores principales: Gu, Fei, Jiang, Wei, Kang, Fangbing, Su, Tianyuan, Yang, Xiaoya, Qi, Qingsheng, Liang, Quanfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10183009/
https://www.ncbi.nlm.nih.gov/pubmed/37179427
http://dx.doi.org/10.1038/s42003-023-04904-0
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author Gu, Fei
Jiang, Wei
Kang, Fangbing
Su, Tianyuan
Yang, Xiaoya
Qi, Qingsheng
Liang, Quanfeng
author_facet Gu, Fei
Jiang, Wei
Kang, Fangbing
Su, Tianyuan
Yang, Xiaoya
Qi, Qingsheng
Liang, Quanfeng
author_sort Gu, Fei
collection PubMed
description Synthetic oscillators have become a research hotspot because of their complexity and importance. The construction and stable operation of oscillators in large-scale environments are important and challenging. Here, we introduce a synthetic population-level oscillator in Escherichia coli that operates stably during continuous culture in non-microfluidic environments without the addition of inducers or frequent dilution. Specifically, quorum-sensing components and protease regulating elements are employed, which form delayed negative feedback to trigger oscillation and accomplish the reset of signals through transcriptional and post-translational regulation. We test the circuit in devices with 1 mL, 50 mL, 400 mL of medium, and demonstrate that the circuit could maintain stable population-level oscillations. Finally, we explore potential applications of the circuit in regulating cellular morphology and metabolism. Our work contributes to the design and testing of synthetic biological clocks that function in large populations.
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spelling pubmed-101830092023-05-15 A synthetic population-level oscillator in non-microfluidic environments Gu, Fei Jiang, Wei Kang, Fangbing Su, Tianyuan Yang, Xiaoya Qi, Qingsheng Liang, Quanfeng Commun Biol Article Synthetic oscillators have become a research hotspot because of their complexity and importance. The construction and stable operation of oscillators in large-scale environments are important and challenging. Here, we introduce a synthetic population-level oscillator in Escherichia coli that operates stably during continuous culture in non-microfluidic environments without the addition of inducers or frequent dilution. Specifically, quorum-sensing components and protease regulating elements are employed, which form delayed negative feedback to trigger oscillation and accomplish the reset of signals through transcriptional and post-translational regulation. We test the circuit in devices with 1 mL, 50 mL, 400 mL of medium, and demonstrate that the circuit could maintain stable population-level oscillations. Finally, we explore potential applications of the circuit in regulating cellular morphology and metabolism. Our work contributes to the design and testing of synthetic biological clocks that function in large populations. Nature Publishing Group UK 2023-05-13 /pmc/articles/PMC10183009/ /pubmed/37179427 http://dx.doi.org/10.1038/s42003-023-04904-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Gu, Fei
Jiang, Wei
Kang, Fangbing
Su, Tianyuan
Yang, Xiaoya
Qi, Qingsheng
Liang, Quanfeng
A synthetic population-level oscillator in non-microfluidic environments
title A synthetic population-level oscillator in non-microfluidic environments
title_full A synthetic population-level oscillator in non-microfluidic environments
title_fullStr A synthetic population-level oscillator in non-microfluidic environments
title_full_unstemmed A synthetic population-level oscillator in non-microfluidic environments
title_short A synthetic population-level oscillator in non-microfluidic environments
title_sort synthetic population-level oscillator in non-microfluidic environments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10183009/
https://www.ncbi.nlm.nih.gov/pubmed/37179427
http://dx.doi.org/10.1038/s42003-023-04904-0
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