Cargando…

Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection

BACKGROUND: Thoracic aortic aneurysm and dissection (TAAD) are devastating cardiovascular diseases with a high rate of disability and mortality. Lysine succinylation, a newly found post-translational modification, has been reported to play an important role in cardiovascular diseases. However, how s...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Yu, Zhang, Hongwei, Wang, Haiyue, Wang, Chenhao, Yang, Peng, Lu, Chen, Liu, Yu, Xu, Zhenyuan, Xie, Yi, Hu, Jia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10183161/
https://www.ncbi.nlm.nih.gov/pubmed/37193023
http://dx.doi.org/10.7717/peerj.15258
_version_ 1785041894831554560
author Zhang, Yu
Zhang, Hongwei
Wang, Haiyue
Wang, Chenhao
Yang, Peng
Lu, Chen
Liu, Yu
Xu, Zhenyuan
Xie, Yi
Hu, Jia
author_facet Zhang, Yu
Zhang, Hongwei
Wang, Haiyue
Wang, Chenhao
Yang, Peng
Lu, Chen
Liu, Yu
Xu, Zhenyuan
Xie, Yi
Hu, Jia
author_sort Zhang, Yu
collection PubMed
description BACKGROUND: Thoracic aortic aneurysm and dissection (TAAD) are devastating cardiovascular diseases with a high rate of disability and mortality. Lysine succinylation, a newly found post-translational modification, has been reported to play an important role in cardiovascular diseases. However, how succinylation modification influences TAAD remains obscure. METHODS: Ascending aortic tissues were obtained from patients with thoracic aortic aneurysm (TAA, n = 6), thoracic aortic dissection (TAD) with pre-existing aortic aneurysm (n = 6), and healthy subjects (n = 6). Global lysine succinylation level was analyzed by Western blotting. The differentially expressed proteins (DEPs) were analyzed by tandem mass tag (TMT) labeling and mass spectrometry. Succinylation-related proteins selected from the literature review and AmiGO database were set as a reference inventory for further analysis. Then, the pathological aortic sections were chosen to verify the proteomic results by Western blotting and qRT-PCR. RESULTS: The level of global lysine succinylation significantly increased in TAA and TAD patients compared with healthy subjects. Of all proteins identified by proteomic analysis, 197 common DEPs were screened both in TAA and TAD group compared with the control group, of which 93 proteins were significantly upregulated while 104 were downregulated. Among these 197 DEPs, OXCT1 overlapped with the succinylation-related proteins and was selected as the target protein involved in thoracic aortic pathogenesis. OXCT1 was further verified by Western blotting and qRT-PCR, and the results showed that OXCT1 in TAA and TAD patients was significantly lower than that in healthy donors (p < 0.001), which was consistent with the proteomic results. CONCLUSIONS: OXCT1 represents novel biomarkers for lysine succinylation of TAAD and might be a therapeutic target in the future.
format Online
Article
Text
id pubmed-10183161
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher PeerJ Inc.
record_format MEDLINE/PubMed
spelling pubmed-101831612023-05-15 Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection Zhang, Yu Zhang, Hongwei Wang, Haiyue Wang, Chenhao Yang, Peng Lu, Chen Liu, Yu Xu, Zhenyuan Xie, Yi Hu, Jia PeerJ Bioinformatics BACKGROUND: Thoracic aortic aneurysm and dissection (TAAD) are devastating cardiovascular diseases with a high rate of disability and mortality. Lysine succinylation, a newly found post-translational modification, has been reported to play an important role in cardiovascular diseases. However, how succinylation modification influences TAAD remains obscure. METHODS: Ascending aortic tissues were obtained from patients with thoracic aortic aneurysm (TAA, n = 6), thoracic aortic dissection (TAD) with pre-existing aortic aneurysm (n = 6), and healthy subjects (n = 6). Global lysine succinylation level was analyzed by Western blotting. The differentially expressed proteins (DEPs) were analyzed by tandem mass tag (TMT) labeling and mass spectrometry. Succinylation-related proteins selected from the literature review and AmiGO database were set as a reference inventory for further analysis. Then, the pathological aortic sections were chosen to verify the proteomic results by Western blotting and qRT-PCR. RESULTS: The level of global lysine succinylation significantly increased in TAA and TAD patients compared with healthy subjects. Of all proteins identified by proteomic analysis, 197 common DEPs were screened both in TAA and TAD group compared with the control group, of which 93 proteins were significantly upregulated while 104 were downregulated. Among these 197 DEPs, OXCT1 overlapped with the succinylation-related proteins and was selected as the target protein involved in thoracic aortic pathogenesis. OXCT1 was further verified by Western blotting and qRT-PCR, and the results showed that OXCT1 in TAA and TAD patients was significantly lower than that in healthy donors (p < 0.001), which was consistent with the proteomic results. CONCLUSIONS: OXCT1 represents novel biomarkers for lysine succinylation of TAAD and might be a therapeutic target in the future. PeerJ Inc. 2023-05-11 /pmc/articles/PMC10183161/ /pubmed/37193023 http://dx.doi.org/10.7717/peerj.15258 Text en © 2023 Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Zhang, Yu
Zhang, Hongwei
Wang, Haiyue
Wang, Chenhao
Yang, Peng
Lu, Chen
Liu, Yu
Xu, Zhenyuan
Xie, Yi
Hu, Jia
Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection
title Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection
title_full Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection
title_fullStr Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection
title_full_unstemmed Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection
title_short Tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection
title_sort tandem mass tag-based quantitative proteomic analysis identification of succinylation related proteins in pathogenesis of thoracic aortic aneurysm and aortic dissection
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10183161/
https://www.ncbi.nlm.nih.gov/pubmed/37193023
http://dx.doi.org/10.7717/peerj.15258
work_keys_str_mv AT zhangyu tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT zhanghongwei tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT wanghaiyue tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT wangchenhao tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT yangpeng tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT luchen tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT liuyu tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT xuzhenyuan tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT xieyi tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection
AT hujia tandemmasstagbasedquantitativeproteomicanalysisidentificationofsuccinylationrelatedproteinsinpathogenesisofthoracicaorticaneurysmandaorticdissection