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Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis

Renal transplantation is the only efficacious treatment for end‐stage kidney disease. However, some people have developed renal insufficiency after transplantation, the mechanisms of which have not been well clarified. Previous studies have focused on patient factors, while the effect of gene expres...

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Autores principales: Cao, Zhijun, Jiang, Hao, Zhao, Chunchun, Zhou, Huifeng, Ma, Zheng, Xu, Chen, Zhang, Jianglei, Jiang, Minjun, Wang, Zhenfan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10183702/
https://www.ncbi.nlm.nih.gov/pubmed/37002788
http://dx.doi.org/10.1111/jcmm.17737
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author Cao, Zhijun
Jiang, Hao
Zhao, Chunchun
Zhou, Huifeng
Ma, Zheng
Xu, Chen
Zhang, Jianglei
Jiang, Minjun
Wang, Zhenfan
author_facet Cao, Zhijun
Jiang, Hao
Zhao, Chunchun
Zhou, Huifeng
Ma, Zheng
Xu, Chen
Zhang, Jianglei
Jiang, Minjun
Wang, Zhenfan
author_sort Cao, Zhijun
collection PubMed
description Renal transplantation is the only efficacious treatment for end‐stage kidney disease. However, some people have developed renal insufficiency after transplantation, the mechanisms of which have not been well clarified. Previous studies have focused on patient factors, while the effect of gene expression in the donor kidney on post‐transplant renal function has been less studied. Donor kidney clinical data and mRNA expression status were extracted from the GEO database (GSE147451). Weight gene co‐expression network analysis (WGCNA) and differential gene enrichment analysis were performed. For external validation, we collected data from 122 patients who accepted renal transplantation at several hospitals and measured the level of target genes by qPCR. This study included 192 patients from the GEO data set, and 13 co‐expressed genes were confirmed by WGCNA and differential gene enrichment analysis. Then, the PPI network contained 17 edges as well as 12 nodes, and four central genes (PRKDC, RFC5, RFC3 and RBM14) were identified. We found by collecting data from 122 patients who underwent renal transplantation in several hospitals and by multivariate logistic regression that acute graft‐versus‐host disease postoperative infection, PRKDC [Hazard Ratio (HR) = 4.44; 95% CI = [1.60, 13.68]; p = 0.006] mRNA level correlated with the renal function after transplantation. The prediction model constructed had good predictive accuracy (C‐index = 0.886). Elevated levels of donor kidney PRKDC are associated with renal dysfunction after transplantation. The prediction model of renal function status for post‐transplant recipients based on PRKDC has good predictive accuracy and clinical application.
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spelling pubmed-101837022023-05-16 Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis Cao, Zhijun Jiang, Hao Zhao, Chunchun Zhou, Huifeng Ma, Zheng Xu, Chen Zhang, Jianglei Jiang, Minjun Wang, Zhenfan J Cell Mol Med Original Articles Renal transplantation is the only efficacious treatment for end‐stage kidney disease. However, some people have developed renal insufficiency after transplantation, the mechanisms of which have not been well clarified. Previous studies have focused on patient factors, while the effect of gene expression in the donor kidney on post‐transplant renal function has been less studied. Donor kidney clinical data and mRNA expression status were extracted from the GEO database (GSE147451). Weight gene co‐expression network analysis (WGCNA) and differential gene enrichment analysis were performed. For external validation, we collected data from 122 patients who accepted renal transplantation at several hospitals and measured the level of target genes by qPCR. This study included 192 patients from the GEO data set, and 13 co‐expressed genes were confirmed by WGCNA and differential gene enrichment analysis. Then, the PPI network contained 17 edges as well as 12 nodes, and four central genes (PRKDC, RFC5, RFC3 and RBM14) were identified. We found by collecting data from 122 patients who underwent renal transplantation in several hospitals and by multivariate logistic regression that acute graft‐versus‐host disease postoperative infection, PRKDC [Hazard Ratio (HR) = 4.44; 95% CI = [1.60, 13.68]; p = 0.006] mRNA level correlated with the renal function after transplantation. The prediction model constructed had good predictive accuracy (C‐index = 0.886). Elevated levels of donor kidney PRKDC are associated with renal dysfunction after transplantation. The prediction model of renal function status for post‐transplant recipients based on PRKDC has good predictive accuracy and clinical application. John Wiley and Sons Inc. 2023-04-01 /pmc/articles/PMC10183702/ /pubmed/37002788 http://dx.doi.org/10.1111/jcmm.17737 Text en © 2023 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Cao, Zhijun
Jiang, Hao
Zhao, Chunchun
Zhou, Huifeng
Ma, Zheng
Xu, Chen
Zhang, Jianglei
Jiang, Minjun
Wang, Zhenfan
Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis
title Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis
title_full Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis
title_fullStr Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis
title_full_unstemmed Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis
title_short Up‐regulation of PRKDC was associated with poor renal dysfunction after renal transplantation: A multi‐centre analysis
title_sort up‐regulation of prkdc was associated with poor renal dysfunction after renal transplantation: a multi‐centre analysis
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10183702/
https://www.ncbi.nlm.nih.gov/pubmed/37002788
http://dx.doi.org/10.1111/jcmm.17737
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