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Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations

[Image: see text] Binding forces between biomolecules are ubiquitous in nature but sometimes as weak as a few pico-Newtons (pN). In many cases, the binding partners are attached to biomembranes with the help of a lipid anchor. One important example are glycolipids that promote membrane adhesion thro...

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Autores principales: Kav, Batuhan, Weikl, Thomas R., Schneck, Emanuel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10184124/
https://www.ncbi.nlm.nih.gov/pubmed/37127845
http://dx.doi.org/10.1021/acs.jpcb.3c00063
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author Kav, Batuhan
Weikl, Thomas R.
Schneck, Emanuel
author_facet Kav, Batuhan
Weikl, Thomas R.
Schneck, Emanuel
author_sort Kav, Batuhan
collection PubMed
description [Image: see text] Binding forces between biomolecules are ubiquitous in nature but sometimes as weak as a few pico-Newtons (pN). In many cases, the binding partners are attached to biomembranes with the help of a lipid anchor. One important example are glycolipids that promote membrane adhesion through weak carbohydrate–carbohydrate binding between adjacent membranes. Here, we use molecular dynamics (MD) simulations to quantify the forces generated by bonds involving membrane-anchored molecules. We introduce a method in which the protrusion of the lipid anchors from the membrane acts as the force sensor. Our results with two different glycolipids reveal binding forces of up to 20 pN and corroborate the recent notion that carbohydrate–carbohydrate interactions are generic rather than specific.
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spelling pubmed-101841242023-05-16 Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations Kav, Batuhan Weikl, Thomas R. Schneck, Emanuel J Phys Chem B [Image: see text] Binding forces between biomolecules are ubiquitous in nature but sometimes as weak as a few pico-Newtons (pN). In many cases, the binding partners are attached to biomembranes with the help of a lipid anchor. One important example are glycolipids that promote membrane adhesion through weak carbohydrate–carbohydrate binding between adjacent membranes. Here, we use molecular dynamics (MD) simulations to quantify the forces generated by bonds involving membrane-anchored molecules. We introduce a method in which the protrusion of the lipid anchors from the membrane acts as the force sensor. Our results with two different glycolipids reveal binding forces of up to 20 pN and corroborate the recent notion that carbohydrate–carbohydrate interactions are generic rather than specific. American Chemical Society 2023-04-26 /pmc/articles/PMC10184124/ /pubmed/37127845 http://dx.doi.org/10.1021/acs.jpcb.3c00063 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Kav, Batuhan
Weikl, Thomas R.
Schneck, Emanuel
Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations
title Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations
title_full Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations
title_fullStr Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations
title_full_unstemmed Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations
title_short Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations
title_sort measuring pico-newton forces with lipid anchors as force sensors in molecular dynamics simulations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10184124/
https://www.ncbi.nlm.nih.gov/pubmed/37127845
http://dx.doi.org/10.1021/acs.jpcb.3c00063
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