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The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)

Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. pa...

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Autores principales: Huang, Lei, Xu, Xinwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10184611/
https://www.ncbi.nlm.nih.gov/pubmed/37197648
http://dx.doi.org/10.1080/23802359.2023.2209216
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author Huang, Lei
Xu, Xinwei
author_facet Huang, Lei
Xu, Xinwei
author_sort Huang, Lei
collection PubMed
description Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. palustris, which has not been reported previously. The chloroplast genome of Z. palustris displays a quadripartite structure with a length of 155,262 base pairs (bp), comprising a large single copy (LSC) region of 85,397 bp, a small single copy (SSC) region of 18,057 bp, and a pair of inverted repeat (IR) regions of 25,904 bp. The GC content of the genome is 35.8%, with corresponding values of 33.4% for the LSC, 28.2% for the SSC, and 42.5% for the IR regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis within the order Alismatales revealed that Z. palustris clusters with the clade of Potamogeton perfoliatus, P. crispus and Stuckenia pectinata.
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spelling pubmed-101846112023-05-16 The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) Huang, Lei Xu, Xinwei Mitochondrial DNA B Resour Plastome Announcement Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. palustris, which has not been reported previously. The chloroplast genome of Z. palustris displays a quadripartite structure with a length of 155,262 base pairs (bp), comprising a large single copy (LSC) region of 85,397 bp, a small single copy (SSC) region of 18,057 bp, and a pair of inverted repeat (IR) regions of 25,904 bp. The GC content of the genome is 35.8%, with corresponding values of 33.4% for the LSC, 28.2% for the SSC, and 42.5% for the IR regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis within the order Alismatales revealed that Z. palustris clusters with the clade of Potamogeton perfoliatus, P. crispus and Stuckenia pectinata. Taylor & Francis 2023-05-12 /pmc/articles/PMC10184611/ /pubmed/37197648 http://dx.doi.org/10.1080/23802359.2023.2209216 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Plastome Announcement
Huang, Lei
Xu, Xinwei
The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
title The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
title_full The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
title_fullStr The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
title_full_unstemmed The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
title_short The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
title_sort complete chloroplast genome sequence of zannichellia palustris (potamogetonaceae)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10184611/
https://www.ncbi.nlm.nih.gov/pubmed/37197648
http://dx.doi.org/10.1080/23802359.2023.2209216
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