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The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. pa...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10184611/ https://www.ncbi.nlm.nih.gov/pubmed/37197648 http://dx.doi.org/10.1080/23802359.2023.2209216 |
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author | Huang, Lei Xu, Xinwei |
author_facet | Huang, Lei Xu, Xinwei |
author_sort | Huang, Lei |
collection | PubMed |
description | Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. palustris, which has not been reported previously. The chloroplast genome of Z. palustris displays a quadripartite structure with a length of 155,262 base pairs (bp), comprising a large single copy (LSC) region of 85,397 bp, a small single copy (SSC) region of 18,057 bp, and a pair of inverted repeat (IR) regions of 25,904 bp. The GC content of the genome is 35.8%, with corresponding values of 33.4% for the LSC, 28.2% for the SSC, and 42.5% for the IR regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis within the order Alismatales revealed that Z. palustris clusters with the clade of Potamogeton perfoliatus, P. crispus and Stuckenia pectinata. |
format | Online Article Text |
id | pubmed-10184611 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-101846112023-05-16 The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) Huang, Lei Xu, Xinwei Mitochondrial DNA B Resour Plastome Announcement Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. palustris, which has not been reported previously. The chloroplast genome of Z. palustris displays a quadripartite structure with a length of 155,262 base pairs (bp), comprising a large single copy (LSC) region of 85,397 bp, a small single copy (SSC) region of 18,057 bp, and a pair of inverted repeat (IR) regions of 25,904 bp. The GC content of the genome is 35.8%, with corresponding values of 33.4% for the LSC, 28.2% for the SSC, and 42.5% for the IR regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis within the order Alismatales revealed that Z. palustris clusters with the clade of Potamogeton perfoliatus, P. crispus and Stuckenia pectinata. Taylor & Francis 2023-05-12 /pmc/articles/PMC10184611/ /pubmed/37197648 http://dx.doi.org/10.1080/23802359.2023.2209216 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent. |
spellingShingle | Plastome Announcement Huang, Lei Xu, Xinwei The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title | The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_full | The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_fullStr | The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_short | The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_sort | complete chloroplast genome sequence of zannichellia palustris (potamogetonaceae) |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10184611/ https://www.ncbi.nlm.nih.gov/pubmed/37197648 http://dx.doi.org/10.1080/23802359.2023.2209216 |
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