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Generation and applications of simulated datasets to integrate social network and demographic analyses
Social networks are tied to population dynamics; interactions are driven by population density and demographic structure, while social relationships can be key determinants of survival and reproductive success. However, difficulties integrating models used in demography and network analysis have lim...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10185435/ https://www.ncbi.nlm.nih.gov/pubmed/37200911 http://dx.doi.org/10.1002/ece3.9871 |
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author | Silk, Matthew J. Gimenez, Olivier |
author_facet | Silk, Matthew J. Gimenez, Olivier |
author_sort | Silk, Matthew J. |
collection | PubMed |
description | Social networks are tied to population dynamics; interactions are driven by population density and demographic structure, while social relationships can be key determinants of survival and reproductive success. However, difficulties integrating models used in demography and network analysis have limited research at this interface. We introduce the R package genNetDem for simulating integrated network–demographic datasets. It can be used to create longitudinal social network and/or capture–recapture datasets with known properties. It incorporates the ability to generate populations and their social networks, generate grouping events using these networks, simulate social network effects on individual survival, and flexibly sample these longitudinal datasets of social associations. By generating co‐capture data with known statistical relationships, it provides functionality for methodological research. We demonstrate its use with case studies testing how imputation and sampling design influence the success of adding network traits to conventional Cormack–Jolly–Seber (CJS) models. We show that incorporating social network effects into CJS models generates qualitatively accurate results, but with downward‐biased parameter estimates when network position influences survival. Biases are greater when fewer interactions are sampled or fewer individuals observed in each interaction. While our results indicate the potential of incorporating social effects within demographic models, they show that imputing missing network measures alone is insufficient to accurately estimate social effects on survival, pointing to the importance of incorporating network imputation approaches. genNetDem provides a flexible tool to aid these methodological advancements and help researchers testing other sampling considerations in social network studies. |
format | Online Article Text |
id | pubmed-10185435 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-101854352023-05-17 Generation and applications of simulated datasets to integrate social network and demographic analyses Silk, Matthew J. Gimenez, Olivier Ecol Evol Research Articles Social networks are tied to population dynamics; interactions are driven by population density and demographic structure, while social relationships can be key determinants of survival and reproductive success. However, difficulties integrating models used in demography and network analysis have limited research at this interface. We introduce the R package genNetDem for simulating integrated network–demographic datasets. It can be used to create longitudinal social network and/or capture–recapture datasets with known properties. It incorporates the ability to generate populations and their social networks, generate grouping events using these networks, simulate social network effects on individual survival, and flexibly sample these longitudinal datasets of social associations. By generating co‐capture data with known statistical relationships, it provides functionality for methodological research. We demonstrate its use with case studies testing how imputation and sampling design influence the success of adding network traits to conventional Cormack–Jolly–Seber (CJS) models. We show that incorporating social network effects into CJS models generates qualitatively accurate results, but with downward‐biased parameter estimates when network position influences survival. Biases are greater when fewer interactions are sampled or fewer individuals observed in each interaction. While our results indicate the potential of incorporating social effects within demographic models, they show that imputing missing network measures alone is insufficient to accurately estimate social effects on survival, pointing to the importance of incorporating network imputation approaches. genNetDem provides a flexible tool to aid these methodological advancements and help researchers testing other sampling considerations in social network studies. John Wiley and Sons Inc. 2023-05-15 /pmc/articles/PMC10185435/ /pubmed/37200911 http://dx.doi.org/10.1002/ece3.9871 Text en © 2023 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Silk, Matthew J. Gimenez, Olivier Generation and applications of simulated datasets to integrate social network and demographic analyses |
title | Generation and applications of simulated datasets to integrate social network and demographic analyses |
title_full | Generation and applications of simulated datasets to integrate social network and demographic analyses |
title_fullStr | Generation and applications of simulated datasets to integrate social network and demographic analyses |
title_full_unstemmed | Generation and applications of simulated datasets to integrate social network and demographic analyses |
title_short | Generation and applications of simulated datasets to integrate social network and demographic analyses |
title_sort | generation and applications of simulated datasets to integrate social network and demographic analyses |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10185435/ https://www.ncbi.nlm.nih.gov/pubmed/37200911 http://dx.doi.org/10.1002/ece3.9871 |
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