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Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis

BACKGROUND: Increasing evidence supports a relationship between E twenty-six variant transcription factor 4 (ETV4) and several cancers, but no pan-cancer analysis has been reported. METHODS: The present study surveyed the effects of ETV4 on cancer using RNA sequencing data obtained from The Cancer G...

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Autores principales: Zhang, Rui, Peng, Yanfang, Gao, Zhe, Qian, Jing, Yang, Kang, Wang, Xinfa, Lu, Wenjing, Zhu, Yongjie, Qiu, Dezhi, Jin, Tong, Wang, Gang, He, Junping, Liu, Ning
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10185867/
https://www.ncbi.nlm.nih.gov/pubmed/37205199
http://dx.doi.org/10.3389/fonc.2023.1121258
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author Zhang, Rui
Peng, Yanfang
Gao, Zhe
Qian, Jing
Yang, Kang
Wang, Xinfa
Lu, Wenjing
Zhu, Yongjie
Qiu, Dezhi
Jin, Tong
Wang, Gang
He, Junping
Liu, Ning
author_facet Zhang, Rui
Peng, Yanfang
Gao, Zhe
Qian, Jing
Yang, Kang
Wang, Xinfa
Lu, Wenjing
Zhu, Yongjie
Qiu, Dezhi
Jin, Tong
Wang, Gang
He, Junping
Liu, Ning
author_sort Zhang, Rui
collection PubMed
description BACKGROUND: Increasing evidence supports a relationship between E twenty-six variant transcription factor 4 (ETV4) and several cancers, but no pan-cancer analysis has been reported. METHODS: The present study surveyed the effects of ETV4 on cancer using RNA sequencing data obtained from The Cancer Genome Atlas and GTEx, and further explored its role in drug sensitivity using data from Cellminer. Differential expression analyses were conducted for multiple cancers using R software. Cox regression and survival analysis were employed to calculate correlations between ETV4 levels and survival outcomes in multiple cancers using the online tool Sangerbox. ETV4 expression was also compared with immunity, heterogeneity, stemness, mismatch repair genes, and DNA methylation among different cancers. RESULTS: ETV4 was found to be significantly upregulated in 28 tumors. Upregulation of ETV4 was associated with poor overall survival, progression free interval, disease-free-interval, and disease specific survival in several cancer types. Expression of ETV4 was also remarkably correlated with immune cell infiltration, tumor heterogeneity, mismatch repair gene expression, DNA methylation, and tumor stemness. Furthermore, ETV4 expression seemed to affect sensitivity to a number of anticancer drugs. CONCLUSIONS: These results suggest that ETV4 may be useful as a prognostic factor and therapeutic target.
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spelling pubmed-101858672023-05-17 Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis Zhang, Rui Peng, Yanfang Gao, Zhe Qian, Jing Yang, Kang Wang, Xinfa Lu, Wenjing Zhu, Yongjie Qiu, Dezhi Jin, Tong Wang, Gang He, Junping Liu, Ning Front Oncol Oncology BACKGROUND: Increasing evidence supports a relationship between E twenty-six variant transcription factor 4 (ETV4) and several cancers, but no pan-cancer analysis has been reported. METHODS: The present study surveyed the effects of ETV4 on cancer using RNA sequencing data obtained from The Cancer Genome Atlas and GTEx, and further explored its role in drug sensitivity using data from Cellminer. Differential expression analyses were conducted for multiple cancers using R software. Cox regression and survival analysis were employed to calculate correlations between ETV4 levels and survival outcomes in multiple cancers using the online tool Sangerbox. ETV4 expression was also compared with immunity, heterogeneity, stemness, mismatch repair genes, and DNA methylation among different cancers. RESULTS: ETV4 was found to be significantly upregulated in 28 tumors. Upregulation of ETV4 was associated with poor overall survival, progression free interval, disease-free-interval, and disease specific survival in several cancer types. Expression of ETV4 was also remarkably correlated with immune cell infiltration, tumor heterogeneity, mismatch repair gene expression, DNA methylation, and tumor stemness. Furthermore, ETV4 expression seemed to affect sensitivity to a number of anticancer drugs. CONCLUSIONS: These results suggest that ETV4 may be useful as a prognostic factor and therapeutic target. Frontiers Media S.A. 2023-05-02 /pmc/articles/PMC10185867/ /pubmed/37205199 http://dx.doi.org/10.3389/fonc.2023.1121258 Text en Copyright © 2023 Zhang, Peng, Gao, Qian, Yang, Wang, Lu, Zhu, Qiu, Jin, Wang, He and Liu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Zhang, Rui
Peng, Yanfang
Gao, Zhe
Qian, Jing
Yang, Kang
Wang, Xinfa
Lu, Wenjing
Zhu, Yongjie
Qiu, Dezhi
Jin, Tong
Wang, Gang
He, Junping
Liu, Ning
Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis
title Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis
title_full Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis
title_fullStr Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis
title_full_unstemmed Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis
title_short Oncogenic role and drug sensitivity of ETV4 in human tumors: a pan-cancer analysis
title_sort oncogenic role and drug sensitivity of etv4 in human tumors: a pan-cancer analysis
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10185867/
https://www.ncbi.nlm.nih.gov/pubmed/37205199
http://dx.doi.org/10.3389/fonc.2023.1121258
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