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The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases

The development of multiomic profiling tools has rapidly expanded in recent years, along with their use in profiling skin tissues in various contexts, including dermatologic diseases. Among these tools, single-cell RNA-sequencing (scRNA-seq) and spatial transcriptomics (ST) have emerged as widely ad...

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Detalles Bibliográficos
Autores principales: Houser, Aubrey E., Kazmi, Abiha, Nair, Arjun K., Ji, Andrew L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10186616/
https://www.ncbi.nlm.nih.gov/pubmed/37205302
http://dx.doi.org/10.1016/j.xjidi.2023.100198
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author Houser, Aubrey E.
Kazmi, Abiha
Nair, Arjun K.
Ji, Andrew L.
author_facet Houser, Aubrey E.
Kazmi, Abiha
Nair, Arjun K.
Ji, Andrew L.
author_sort Houser, Aubrey E.
collection PubMed
description The development of multiomic profiling tools has rapidly expanded in recent years, along with their use in profiling skin tissues in various contexts, including dermatologic diseases. Among these tools, single-cell RNA-sequencing (scRNA-seq) and spatial transcriptomics (ST) have emerged as widely adopted and powerful assays for elucidating key cellular components and their spatial arrangement within skin disease. In this paper, we review the recent biological insights gained from the use of scRNA-seq and ST and the advantages of combining both for profiling skin diseases, including aberrant wound healing, inflammatory skin diseases, and cancer. We discuss the role of scRNA-seq and ST in improving skin disease treatments and moving toward the goal of achieving precision medicine in dermatology, whereby patients can be optimally matched to treatments that maximize therapeutic response.
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spelling pubmed-101866162023-05-17 The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases Houser, Aubrey E. Kazmi, Abiha Nair, Arjun K. Ji, Andrew L. JID Innov Review The development of multiomic profiling tools has rapidly expanded in recent years, along with their use in profiling skin tissues in various contexts, including dermatologic diseases. Among these tools, single-cell RNA-sequencing (scRNA-seq) and spatial transcriptomics (ST) have emerged as widely adopted and powerful assays for elucidating key cellular components and their spatial arrangement within skin disease. In this paper, we review the recent biological insights gained from the use of scRNA-seq and ST and the advantages of combining both for profiling skin diseases, including aberrant wound healing, inflammatory skin diseases, and cancer. We discuss the role of scRNA-seq and ST in improving skin disease treatments and moving toward the goal of achieving precision medicine in dermatology, whereby patients can be optimally matched to treatments that maximize therapeutic response. Elsevier 2023-03-22 /pmc/articles/PMC10186616/ /pubmed/37205302 http://dx.doi.org/10.1016/j.xjidi.2023.100198 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Review
Houser, Aubrey E.
Kazmi, Abiha
Nair, Arjun K.
Ji, Andrew L.
The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases
title The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases
title_full The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases
title_fullStr The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases
title_full_unstemmed The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases
title_short The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases
title_sort use of single-cell rna-sequencing and spatial transcriptomics in understanding the pathogenesis and treatment of skin diseases
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10186616/
https://www.ncbi.nlm.nih.gov/pubmed/37205302
http://dx.doi.org/10.1016/j.xjidi.2023.100198
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