Cargando…
The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases
The development of multiomic profiling tools has rapidly expanded in recent years, along with their use in profiling skin tissues in various contexts, including dermatologic diseases. Among these tools, single-cell RNA-sequencing (scRNA-seq) and spatial transcriptomics (ST) have emerged as widely ad...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10186616/ https://www.ncbi.nlm.nih.gov/pubmed/37205302 http://dx.doi.org/10.1016/j.xjidi.2023.100198 |
_version_ | 1785042598420807680 |
---|---|
author | Houser, Aubrey E. Kazmi, Abiha Nair, Arjun K. Ji, Andrew L. |
author_facet | Houser, Aubrey E. Kazmi, Abiha Nair, Arjun K. Ji, Andrew L. |
author_sort | Houser, Aubrey E. |
collection | PubMed |
description | The development of multiomic profiling tools has rapidly expanded in recent years, along with their use in profiling skin tissues in various contexts, including dermatologic diseases. Among these tools, single-cell RNA-sequencing (scRNA-seq) and spatial transcriptomics (ST) have emerged as widely adopted and powerful assays for elucidating key cellular components and their spatial arrangement within skin disease. In this paper, we review the recent biological insights gained from the use of scRNA-seq and ST and the advantages of combining both for profiling skin diseases, including aberrant wound healing, inflammatory skin diseases, and cancer. We discuss the role of scRNA-seq and ST in improving skin disease treatments and moving toward the goal of achieving precision medicine in dermatology, whereby patients can be optimally matched to treatments that maximize therapeutic response. |
format | Online Article Text |
id | pubmed-10186616 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-101866162023-05-17 The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases Houser, Aubrey E. Kazmi, Abiha Nair, Arjun K. Ji, Andrew L. JID Innov Review The development of multiomic profiling tools has rapidly expanded in recent years, along with their use in profiling skin tissues in various contexts, including dermatologic diseases. Among these tools, single-cell RNA-sequencing (scRNA-seq) and spatial transcriptomics (ST) have emerged as widely adopted and powerful assays for elucidating key cellular components and their spatial arrangement within skin disease. In this paper, we review the recent biological insights gained from the use of scRNA-seq and ST and the advantages of combining both for profiling skin diseases, including aberrant wound healing, inflammatory skin diseases, and cancer. We discuss the role of scRNA-seq and ST in improving skin disease treatments and moving toward the goal of achieving precision medicine in dermatology, whereby patients can be optimally matched to treatments that maximize therapeutic response. Elsevier 2023-03-22 /pmc/articles/PMC10186616/ /pubmed/37205302 http://dx.doi.org/10.1016/j.xjidi.2023.100198 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Review Houser, Aubrey E. Kazmi, Abiha Nair, Arjun K. Ji, Andrew L. The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases |
title | The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases |
title_full | The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases |
title_fullStr | The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases |
title_full_unstemmed | The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases |
title_short | The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases |
title_sort | use of single-cell rna-sequencing and spatial transcriptomics in understanding the pathogenesis and treatment of skin diseases |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10186616/ https://www.ncbi.nlm.nih.gov/pubmed/37205302 http://dx.doi.org/10.1016/j.xjidi.2023.100198 |
work_keys_str_mv | AT houseraubreye theuseofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases AT kazmiabiha theuseofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases AT nairarjunk theuseofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases AT jiandrewl theuseofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases AT houseraubreye useofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases AT kazmiabiha useofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases AT nairarjunk useofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases AT jiandrewl useofsinglecellrnasequencingandspatialtranscriptomicsinunderstandingthepathogenesisandtreatmentofskindiseases |