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Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer

Lung cancer is a prevalent cancer type worldwide that often remains asymptomatic in its early stages and is frequently diagnosed at an advanced stage with a poor prognosis due to the lack of effective diagnostic techniques and molecular biomarkers. However, emerging evidence suggests that extracellu...

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Autores principales: Yang, Qinsi, Luo, Jiaxin, Xu, Hao, Huang, Liu, Zhu, Xinxi, Li, Hengrui, Yang, Rui, Peng, Bo, Sun, Da, Zhu, Qingfu, Liu, Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10186743/
https://www.ncbi.nlm.nih.gov/pubmed/37189121
http://dx.doi.org/10.1186/s12951-023-01908-0
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author Yang, Qinsi
Luo, Jiaxin
Xu, Hao
Huang, Liu
Zhu, Xinxi
Li, Hengrui
Yang, Rui
Peng, Bo
Sun, Da
Zhu, Qingfu
Liu, Fei
author_facet Yang, Qinsi
Luo, Jiaxin
Xu, Hao
Huang, Liu
Zhu, Xinxi
Li, Hengrui
Yang, Rui
Peng, Bo
Sun, Da
Zhu, Qingfu
Liu, Fei
author_sort Yang, Qinsi
collection PubMed
description Lung cancer is a prevalent cancer type worldwide that often remains asymptomatic in its early stages and is frequently diagnosed at an advanced stage with a poor prognosis due to the lack of effective diagnostic techniques and molecular biomarkers. However, emerging evidence suggests that extracellular vesicles (EVs) may promote lung cancer cell proliferation and metastasis, and modulate the anti-tumor immune response in lung cancer carcinogenesis, making them potential biomarkers for early cancer detection. To investigate the potential of urinary EVs for non-invasive detection and screening of patients at early stages, we studied metabolomic signatures of lung cancer. Specifically, we conducted metabolomic analysis of 102 EV samples and identified metabolome profiles of urinary EVs, including organic acids and derivatives, lipids and lipid-like molecules, organheterocyclic compounds, and benzenoids. Using machine learning with a random forest model, we screened for potential markers of lung cancer and identified a marker panel consisting of Kanzonol Z, Xanthosine, Nervonyl carnitine, and 3,4-Dihydroxybenzaldehyde, which exhibited a diagnostic potency of 96% for the testing cohort (AUC value). Importantly, this marker panel also demonstrated effective prediction for the validation set, with an AUC value of 84%, indicating the reliability of the marker screening process. Our findings suggest that the metabolomic analysis of urinary EVs provides a promising source of non-invasive markers for lung cancer diagnostics. We believe that the EV metabolic signatures could be used to develop clinical applications for the early detection and screening of lung cancer, potentially improving patient outcomes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12951-023-01908-0.
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spelling pubmed-101867432023-05-17 Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer Yang, Qinsi Luo, Jiaxin Xu, Hao Huang, Liu Zhu, Xinxi Li, Hengrui Yang, Rui Peng, Bo Sun, Da Zhu, Qingfu Liu, Fei J Nanobiotechnology Research Lung cancer is a prevalent cancer type worldwide that often remains asymptomatic in its early stages and is frequently diagnosed at an advanced stage with a poor prognosis due to the lack of effective diagnostic techniques and molecular biomarkers. However, emerging evidence suggests that extracellular vesicles (EVs) may promote lung cancer cell proliferation and metastasis, and modulate the anti-tumor immune response in lung cancer carcinogenesis, making them potential biomarkers for early cancer detection. To investigate the potential of urinary EVs for non-invasive detection and screening of patients at early stages, we studied metabolomic signatures of lung cancer. Specifically, we conducted metabolomic analysis of 102 EV samples and identified metabolome profiles of urinary EVs, including organic acids and derivatives, lipids and lipid-like molecules, organheterocyclic compounds, and benzenoids. Using machine learning with a random forest model, we screened for potential markers of lung cancer and identified a marker panel consisting of Kanzonol Z, Xanthosine, Nervonyl carnitine, and 3,4-Dihydroxybenzaldehyde, which exhibited a diagnostic potency of 96% for the testing cohort (AUC value). Importantly, this marker panel also demonstrated effective prediction for the validation set, with an AUC value of 84%, indicating the reliability of the marker screening process. Our findings suggest that the metabolomic analysis of urinary EVs provides a promising source of non-invasive markers for lung cancer diagnostics. We believe that the EV metabolic signatures could be used to develop clinical applications for the early detection and screening of lung cancer, potentially improving patient outcomes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12951-023-01908-0. BioMed Central 2023-05-16 /pmc/articles/PMC10186743/ /pubmed/37189121 http://dx.doi.org/10.1186/s12951-023-01908-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Yang, Qinsi
Luo, Jiaxin
Xu, Hao
Huang, Liu
Zhu, Xinxi
Li, Hengrui
Yang, Rui
Peng, Bo
Sun, Da
Zhu, Qingfu
Liu, Fei
Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer
title Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer
title_full Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer
title_fullStr Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer
title_full_unstemmed Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer
title_short Metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer
title_sort metabolomic investigation of urinary extracellular vesicles for early detection and screening of lung cancer
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10186743/
https://www.ncbi.nlm.nih.gov/pubmed/37189121
http://dx.doi.org/10.1186/s12951-023-01908-0
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