The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis

Lithocarpus litseifolius (Hance) Chun 1837 is an evergreen tree of Fagaceae, which can be used as sweet tea, natural sweetener, and precious medicinal material. The complete chloroplast genome of L. litseifolius was sequenced and its phylogenetic relationship was analyzed in this study. The chloropl...

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Autores principales: Qiu, Xiaoyan, Xiao, Shengen, Tian, Yuqiao, Li, Ziqiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10187088/
https://www.ncbi.nlm.nih.gov/pubmed/37200682
http://dx.doi.org/10.1080/23802359.2023.2210422
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author Qiu, Xiaoyan
Xiao, Shengen
Tian, Yuqiao
Li, Ziqiang
author_facet Qiu, Xiaoyan
Xiao, Shengen
Tian, Yuqiao
Li, Ziqiang
author_sort Qiu, Xiaoyan
collection PubMed
description Lithocarpus litseifolius (Hance) Chun 1837 is an evergreen tree of Fagaceae, which can be used as sweet tea, natural sweetener, and precious medicinal material. The complete chloroplast genome of L. litseifolius was sequenced and its phylogenetic relationship was analyzed in this study. The chloroplast genome of L. litseifolius has a circular structure with a length of 161,322 bp, and it contains a pair of inverted repeat regions (IRs 25,897 bp), a large single copy (LSC 90,551 bp), and a small single copy (SSC 18,977 bp). There were 131 genes identified, including 37 tRNA, 8 rRNA, and 86 mRNA genes. Phylogenetic analysis of 23 species of Fagaceae indicated that Lithocarpus is monophyletic with strong bootstrap, and L. litseifolius is genetically closely related to Lithocarpus polystachyus.
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spelling pubmed-101870882023-05-17 The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis Qiu, Xiaoyan Xiao, Shengen Tian, Yuqiao Li, Ziqiang Mitochondrial DNA B Resour Research Article Lithocarpus litseifolius (Hance) Chun 1837 is an evergreen tree of Fagaceae, which can be used as sweet tea, natural sweetener, and precious medicinal material. The complete chloroplast genome of L. litseifolius was sequenced and its phylogenetic relationship was analyzed in this study. The chloroplast genome of L. litseifolius has a circular structure with a length of 161,322 bp, and it contains a pair of inverted repeat regions (IRs 25,897 bp), a large single copy (LSC 90,551 bp), and a small single copy (SSC 18,977 bp). There were 131 genes identified, including 37 tRNA, 8 rRNA, and 86 mRNA genes. Phylogenetic analysis of 23 species of Fagaceae indicated that Lithocarpus is monophyletic with strong bootstrap, and L. litseifolius is genetically closely related to Lithocarpus polystachyus. Taylor & Francis 2023-05-15 /pmc/articles/PMC10187088/ /pubmed/37200682 http://dx.doi.org/10.1080/23802359.2023.2210422 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Research Article
Qiu, Xiaoyan
Xiao, Shengen
Tian, Yuqiao
Li, Ziqiang
The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis
title The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis
title_full The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis
title_fullStr The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis
title_full_unstemmed The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis
title_short The complete chloroplast genome sequence of Lithocarpus litseifolius (Hance) Chun 1837 (Fagaceae) and phylogenetic analysis
title_sort complete chloroplast genome sequence of lithocarpus litseifolius (hance) chun 1837 (fagaceae) and phylogenetic analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10187088/
https://www.ncbi.nlm.nih.gov/pubmed/37200682
http://dx.doi.org/10.1080/23802359.2023.2210422
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