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A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing

The forthcoming assembly of the adult Drosophila melanogaster central brain connectome, containing over 125,000 neurons and 50 million synaptic connections, provides a template for examining sensory processing throughout the brain. Here, we create a leaky integrate-and-fire computational model of th...

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Autores principales: Shiu, Philip K., Sterne, Gabriella R., Spiller, Nico, Franconville, Romain, Sandoval, Andrea, Zhou, Joie, Simha, Neha, Kang, Chan Hyuk, Yu, Seongbong, Kim, Jinseop S., Dorkenwald, Sven, Matsliah, Arie, Schlegel, Philipp, Szi-chieh, Yu, McKellar, Claire E., Sterling, Amy, Costa, Marta, Eichler, Katharina, Jefferis, Gregory S.X.E., Murthy, Mala, Bates, Alexander Shakeel, Eckstein, Nils, Funke, Jan, Bidaye, Salil S., Hampel, Stefanie, Seeds, Andrew M., Scott, Kristin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10187186/
https://www.ncbi.nlm.nih.gov/pubmed/37205514
http://dx.doi.org/10.1101/2023.05.02.539144
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author Shiu, Philip K.
Sterne, Gabriella R.
Spiller, Nico
Franconville, Romain
Sandoval, Andrea
Zhou, Joie
Simha, Neha
Kang, Chan Hyuk
Yu, Seongbong
Kim, Jinseop S.
Dorkenwald, Sven
Matsliah, Arie
Schlegel, Philipp
Szi-chieh, Yu
McKellar, Claire E.
Sterling, Amy
Costa, Marta
Eichler, Katharina
Jefferis, Gregory S.X.E.
Murthy, Mala
Bates, Alexander Shakeel
Eckstein, Nils
Funke, Jan
Bidaye, Salil S.
Hampel, Stefanie
Seeds, Andrew M.
Scott, Kristin
author_facet Shiu, Philip K.
Sterne, Gabriella R.
Spiller, Nico
Franconville, Romain
Sandoval, Andrea
Zhou, Joie
Simha, Neha
Kang, Chan Hyuk
Yu, Seongbong
Kim, Jinseop S.
Dorkenwald, Sven
Matsliah, Arie
Schlegel, Philipp
Szi-chieh, Yu
McKellar, Claire E.
Sterling, Amy
Costa, Marta
Eichler, Katharina
Jefferis, Gregory S.X.E.
Murthy, Mala
Bates, Alexander Shakeel
Eckstein, Nils
Funke, Jan
Bidaye, Salil S.
Hampel, Stefanie
Seeds, Andrew M.
Scott, Kristin
author_sort Shiu, Philip K.
collection PubMed
description The forthcoming assembly of the adult Drosophila melanogaster central brain connectome, containing over 125,000 neurons and 50 million synaptic connections, provides a template for examining sensory processing throughout the brain. Here, we create a leaky integrate-and-fire computational model of the entire Drosophila brain, based on neural connectivity and neurotransmitter identity, to study circuit properties of feeding and grooming behaviors. We show that activation of sugar-sensing or water-sensing gustatory neurons in the computational model accurately predicts neurons that respond to tastes and are required for feeding initiation. Computational activation of neurons in the feeding region of the Drosophila brain predicts those that elicit motor neuron firing, a testable hypothesis that we validate by optogenetic activation and behavioral studies. Moreover, computational activation of different classes of gustatory neurons makes accurate predictions of how multiple taste modalities interact, providing circuit-level insight into aversive and appetitive taste processing. Our computational model predicts that the sugar and water pathways form a partially shared appetitive feeding initiation pathway, which our calcium imaging and behavioral experiments confirm. Additionally, we applied this model to mechanosensory circuits and found that computational activation of mechanosensory neurons predicts activation of a small set of neurons comprising the antennal grooming circuit that do not overlap with gustatory circuits, and accurately describes the circuit response upon activation of different mechanosensory subtypes. Our results demonstrate that modeling brain circuits purely from connectivity and predicted neurotransmitter identity generates experimentally testable hypotheses and can accurately describe complete sensorimotor transformations.
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spelling pubmed-101871862023-05-17 A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing Shiu, Philip K. Sterne, Gabriella R. Spiller, Nico Franconville, Romain Sandoval, Andrea Zhou, Joie Simha, Neha Kang, Chan Hyuk Yu, Seongbong Kim, Jinseop S. Dorkenwald, Sven Matsliah, Arie Schlegel, Philipp Szi-chieh, Yu McKellar, Claire E. Sterling, Amy Costa, Marta Eichler, Katharina Jefferis, Gregory S.X.E. Murthy, Mala Bates, Alexander Shakeel Eckstein, Nils Funke, Jan Bidaye, Salil S. Hampel, Stefanie Seeds, Andrew M. Scott, Kristin bioRxiv Article The forthcoming assembly of the adult Drosophila melanogaster central brain connectome, containing over 125,000 neurons and 50 million synaptic connections, provides a template for examining sensory processing throughout the brain. Here, we create a leaky integrate-and-fire computational model of the entire Drosophila brain, based on neural connectivity and neurotransmitter identity, to study circuit properties of feeding and grooming behaviors. We show that activation of sugar-sensing or water-sensing gustatory neurons in the computational model accurately predicts neurons that respond to tastes and are required for feeding initiation. Computational activation of neurons in the feeding region of the Drosophila brain predicts those that elicit motor neuron firing, a testable hypothesis that we validate by optogenetic activation and behavioral studies. Moreover, computational activation of different classes of gustatory neurons makes accurate predictions of how multiple taste modalities interact, providing circuit-level insight into aversive and appetitive taste processing. Our computational model predicts that the sugar and water pathways form a partially shared appetitive feeding initiation pathway, which our calcium imaging and behavioral experiments confirm. Additionally, we applied this model to mechanosensory circuits and found that computational activation of mechanosensory neurons predicts activation of a small set of neurons comprising the antennal grooming circuit that do not overlap with gustatory circuits, and accurately describes the circuit response upon activation of different mechanosensory subtypes. Our results demonstrate that modeling brain circuits purely from connectivity and predicted neurotransmitter identity generates experimentally testable hypotheses and can accurately describe complete sensorimotor transformations. Cold Spring Harbor Laboratory 2023-05-02 /pmc/articles/PMC10187186/ /pubmed/37205514 http://dx.doi.org/10.1101/2023.05.02.539144 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Shiu, Philip K.
Sterne, Gabriella R.
Spiller, Nico
Franconville, Romain
Sandoval, Andrea
Zhou, Joie
Simha, Neha
Kang, Chan Hyuk
Yu, Seongbong
Kim, Jinseop S.
Dorkenwald, Sven
Matsliah, Arie
Schlegel, Philipp
Szi-chieh, Yu
McKellar, Claire E.
Sterling, Amy
Costa, Marta
Eichler, Katharina
Jefferis, Gregory S.X.E.
Murthy, Mala
Bates, Alexander Shakeel
Eckstein, Nils
Funke, Jan
Bidaye, Salil S.
Hampel, Stefanie
Seeds, Andrew M.
Scott, Kristin
A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
title A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
title_full A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
title_fullStr A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
title_full_unstemmed A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
title_short A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
title_sort leaky integrate-and-fire computational model based on the connectome of the entire adult drosophila brain reveals insights into sensorimotor processing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10187186/
https://www.ncbi.nlm.nih.gov/pubmed/37205514
http://dx.doi.org/10.1101/2023.05.02.539144
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