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Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform

Glioblastoma Multiforme (GBM) is the most aggressive and most common primary malignant brain tumor. The age of GBM patients is considered as one of the disease's negative prognostic factors and the mean age of diagnosis is 62 years. A promising approach to preventing both GBM and aging is to id...

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Autores principales: Olsen, Andrea, Harpaz, Zachary, Ren, Christopher, Shneyderman, Anastasia, Veviorskiy, Alexander, Dralkina, Maria, Konnov, Simon, Shcheglova, Olga, Pun, Frank W., Leung, Geoffrey Ho Duen, Leung, Hoi Wing, Ozerov, Ivan V., Aliper, Alex, Korzinkin, Mikhail, Zhavoronkov, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10188351/
https://www.ncbi.nlm.nih.gov/pubmed/37100462
http://dx.doi.org/10.18632/aging.204678
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author Olsen, Andrea
Harpaz, Zachary
Ren, Christopher
Shneyderman, Anastasia
Veviorskiy, Alexander
Dralkina, Maria
Konnov, Simon
Shcheglova, Olga
Pun, Frank W.
Leung, Geoffrey Ho Duen
Leung, Hoi Wing
Ozerov, Ivan V.
Aliper, Alex
Korzinkin, Mikhail
Zhavoronkov, Alex
author_facet Olsen, Andrea
Harpaz, Zachary
Ren, Christopher
Shneyderman, Anastasia
Veviorskiy, Alexander
Dralkina, Maria
Konnov, Simon
Shcheglova, Olga
Pun, Frank W.
Leung, Geoffrey Ho Duen
Leung, Hoi Wing
Ozerov, Ivan V.
Aliper, Alex
Korzinkin, Mikhail
Zhavoronkov, Alex
author_sort Olsen, Andrea
collection PubMed
description Glioblastoma Multiforme (GBM) is the most aggressive and most common primary malignant brain tumor. The age of GBM patients is considered as one of the disease's negative prognostic factors and the mean age of diagnosis is 62 years. A promising approach to preventing both GBM and aging is to identify new potential therapeutic targets that are associated with both conditions as concurrent drivers. In this work, we present a multi-angled approach of identifying targets, which takes into account not only the disease-related genes but also the ones important in aging. For this purpose, we developed three strategies of target identification using the results of correlation analysis augmented with survival data, differences in expression levels and previously published information of aging-related genes. Several studies have recently validated the robustness and applicability of AI-driven computational methods for target identification in both cancer and aging-related diseases. Therefore, we leveraged the AI predictive power of the PandaOmics TargetID engine in order to rank the resulting target hypotheses and prioritize the most promising therapeutic gene targets. We propose cyclic nucleotide gated channel subunit alpha 3 (CNGA3), glutamate dehydrogenase 1 (GLUD1) and sirtuin 1 (SIRT1) as potential novel dual-purpose therapeutic targets to treat aging and GBM.
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spelling pubmed-101883512023-05-18 Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform Olsen, Andrea Harpaz, Zachary Ren, Christopher Shneyderman, Anastasia Veviorskiy, Alexander Dralkina, Maria Konnov, Simon Shcheglova, Olga Pun, Frank W. Leung, Geoffrey Ho Duen Leung, Hoi Wing Ozerov, Ivan V. Aliper, Alex Korzinkin, Mikhail Zhavoronkov, Alex Aging (Albany NY) Research Paper Glioblastoma Multiforme (GBM) is the most aggressive and most common primary malignant brain tumor. The age of GBM patients is considered as one of the disease's negative prognostic factors and the mean age of diagnosis is 62 years. A promising approach to preventing both GBM and aging is to identify new potential therapeutic targets that are associated with both conditions as concurrent drivers. In this work, we present a multi-angled approach of identifying targets, which takes into account not only the disease-related genes but also the ones important in aging. For this purpose, we developed three strategies of target identification using the results of correlation analysis augmented with survival data, differences in expression levels and previously published information of aging-related genes. Several studies have recently validated the robustness and applicability of AI-driven computational methods for target identification in both cancer and aging-related diseases. Therefore, we leveraged the AI predictive power of the PandaOmics TargetID engine in order to rank the resulting target hypotheses and prioritize the most promising therapeutic gene targets. We propose cyclic nucleotide gated channel subunit alpha 3 (CNGA3), glutamate dehydrogenase 1 (GLUD1) and sirtuin 1 (SIRT1) as potential novel dual-purpose therapeutic targets to treat aging and GBM. Impact Journals 2023-04-26 /pmc/articles/PMC10188351/ /pubmed/37100462 http://dx.doi.org/10.18632/aging.204678 Text en Copyright: © 2023 Olsen et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Olsen, Andrea
Harpaz, Zachary
Ren, Christopher
Shneyderman, Anastasia
Veviorskiy, Alexander
Dralkina, Maria
Konnov, Simon
Shcheglova, Olga
Pun, Frank W.
Leung, Geoffrey Ho Duen
Leung, Hoi Wing
Ozerov, Ivan V.
Aliper, Alex
Korzinkin, Mikhail
Zhavoronkov, Alex
Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform
title Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform
title_full Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform
title_fullStr Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform
title_full_unstemmed Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform
title_short Identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using PandaOmics - an AI-enabled biological target discovery platform
title_sort identification of dual-purpose therapeutic targets implicated in aging and glioblastoma multiforme using pandaomics - an ai-enabled biological target discovery platform
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10188351/
https://www.ncbi.nlm.nih.gov/pubmed/37100462
http://dx.doi.org/10.18632/aging.204678
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