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Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat

The challenge of climate change makes it mandatory to improve tolerance to drought stress in bread wheat (Triticum aestivum) via biotechnological approaches. Drought stress experiment was conducted followed by RNA-Seq analysis for leaves of two wheat cultivars namely Giza 168 and Gemmiza 10 with con...

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Autor principal: Abulfaraj, Aala A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10189290/
https://www.ncbi.nlm.nih.gov/pubmed/37206446
http://dx.doi.org/10.1016/j.sjbs.2023.103652
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author Abulfaraj, Aala A.
author_facet Abulfaraj, Aala A.
author_sort Abulfaraj, Aala A.
collection PubMed
description The challenge of climate change makes it mandatory to improve tolerance to drought stress in bread wheat (Triticum aestivum) via biotechnological approaches. Drought stress experiment was conducted followed by RNA-Seq analysis for leaves of two wheat cultivars namely Giza 168 and Gemmiza 10 with contrasting genotypes. Expression patterns of the regulated stress-related genes and concordantly expressed TFs were detected, then, validated via qPCR for two loss-of-function mutants in Arabidopsis background harboring mutated genes analogue to those in wheat. Drought-stress related genes were searched for concordantly expressed TFs and a total of eight TFs were shown to coexpress with 14 stress-related genes. Among these genes, one TF belongs to the zinc finger protein CONSTANS family and proved via qPCR to drive expression of a gene encoding a speculative TF namely zinc transporter 3-like and two other stress related genes encoding tryptophan synthase alpha chain and asparagine synthetase. Known functions of the two TFs under drought stress complement those of the two concordantly expressed stress-related genes, thus, it is likely that they are related. This study highlights the possibility to utilize metabolic engineering approaches to decipher and incorporate existing regulatory frameworks under drought stress in future breeding programs of bread wheat.
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spelling pubmed-101892902023-05-18 Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat Abulfaraj, Aala A. Saudi J Biol Sci Original Article The challenge of climate change makes it mandatory to improve tolerance to drought stress in bread wheat (Triticum aestivum) via biotechnological approaches. Drought stress experiment was conducted followed by RNA-Seq analysis for leaves of two wheat cultivars namely Giza 168 and Gemmiza 10 with contrasting genotypes. Expression patterns of the regulated stress-related genes and concordantly expressed TFs were detected, then, validated via qPCR for two loss-of-function mutants in Arabidopsis background harboring mutated genes analogue to those in wheat. Drought-stress related genes were searched for concordantly expressed TFs and a total of eight TFs were shown to coexpress with 14 stress-related genes. Among these genes, one TF belongs to the zinc finger protein CONSTANS family and proved via qPCR to drive expression of a gene encoding a speculative TF namely zinc transporter 3-like and two other stress related genes encoding tryptophan synthase alpha chain and asparagine synthetase. Known functions of the two TFs under drought stress complement those of the two concordantly expressed stress-related genes, thus, it is likely that they are related. This study highlights the possibility to utilize metabolic engineering approaches to decipher and incorporate existing regulatory frameworks under drought stress in future breeding programs of bread wheat. Elsevier 2023-06 2023-04-14 /pmc/articles/PMC10189290/ /pubmed/37206446 http://dx.doi.org/10.1016/j.sjbs.2023.103652 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Abulfaraj, Aala A.
Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat
title Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat
title_full Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat
title_fullStr Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat
title_full_unstemmed Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat
title_short Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat
title_sort relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10189290/
https://www.ncbi.nlm.nih.gov/pubmed/37206446
http://dx.doi.org/10.1016/j.sjbs.2023.103652
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