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Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae

Gonorrhea is the second most common sexually transmitted infection (STI) with around 87 million cases worldwide estimated in 2016 by the World Health Organization. With over half of the cases being asymptomatic, potential life-threatening complications and increasing numbers of drug-resistant strain...

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Autores principales: Rodriguez-Mateos, Pablo, Ngamsom, Bongkot, Ameyo, Daglus, Wakaba, Patrick, Shiluli, Clement, Iles, Alexander, Gitaka, Jesse, Pamme, Nicole
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191819/
https://www.ncbi.nlm.nih.gov/pubmed/37198361
http://dx.doi.org/10.1007/s00216-023-04734-3
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author Rodriguez-Mateos, Pablo
Ngamsom, Bongkot
Ameyo, Daglus
Wakaba, Patrick
Shiluli, Clement
Iles, Alexander
Gitaka, Jesse
Pamme, Nicole
author_facet Rodriguez-Mateos, Pablo
Ngamsom, Bongkot
Ameyo, Daglus
Wakaba, Patrick
Shiluli, Clement
Iles, Alexander
Gitaka, Jesse
Pamme, Nicole
author_sort Rodriguez-Mateos, Pablo
collection PubMed
description Gonorrhea is the second most common sexually transmitted infection (STI) with around 87 million cases worldwide estimated in 2016 by the World Health Organization. With over half of the cases being asymptomatic, potential life-threatening complications and increasing numbers of drug-resistant strains, routine monitoring of prevalence and incidence of infections are key preventive measures. Whilst gold standard qPCR tests have excellent accuracy, they are neither affordable nor accessible in low-resource settings. In this study, we developed a lab-on-a-chip platform based on microscale immiscible filtration to extract, concentrate and purify Neisseria gonorrhoeae DNA with an integrated detection assay based on colorimetric isothermal amplification. The platform was capable of detecting as low as 500 copies/mL from spiked synthetic urine and showed no cross-reactivity when challenged with DNAs from other common STIs. The credit card–size device allows DNA extraction and purification without power or centrifuges, and the detection reaction only needs a low-tech block heater, providing a straightforward and visual positive/negative result within 1 h. These advantages offer great potential for accurate, affordable and accessible monitoring of gonorrhea infection in resource-poor settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04734-3.
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spelling pubmed-101918192023-05-19 Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae Rodriguez-Mateos, Pablo Ngamsom, Bongkot Ameyo, Daglus Wakaba, Patrick Shiluli, Clement Iles, Alexander Gitaka, Jesse Pamme, Nicole Anal Bioanal Chem Research Paper Gonorrhea is the second most common sexually transmitted infection (STI) with around 87 million cases worldwide estimated in 2016 by the World Health Organization. With over half of the cases being asymptomatic, potential life-threatening complications and increasing numbers of drug-resistant strains, routine monitoring of prevalence and incidence of infections are key preventive measures. Whilst gold standard qPCR tests have excellent accuracy, they are neither affordable nor accessible in low-resource settings. In this study, we developed a lab-on-a-chip platform based on microscale immiscible filtration to extract, concentrate and purify Neisseria gonorrhoeae DNA with an integrated detection assay based on colorimetric isothermal amplification. The platform was capable of detecting as low as 500 copies/mL from spiked synthetic urine and showed no cross-reactivity when challenged with DNAs from other common STIs. The credit card–size device allows DNA extraction and purification without power or centrifuges, and the detection reaction only needs a low-tech block heater, providing a straightforward and visual positive/negative result within 1 h. These advantages offer great potential for accurate, affordable and accessible monitoring of gonorrhea infection in resource-poor settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04734-3. Springer Berlin Heidelberg 2023-05-18 2023 /pmc/articles/PMC10191819/ /pubmed/37198361 http://dx.doi.org/10.1007/s00216-023-04734-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Paper
Rodriguez-Mateos, Pablo
Ngamsom, Bongkot
Ameyo, Daglus
Wakaba, Patrick
Shiluli, Clement
Iles, Alexander
Gitaka, Jesse
Pamme, Nicole
Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae
title Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae
title_full Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae
title_fullStr Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae
title_full_unstemmed Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae
title_short Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae
title_sort integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of neisseria gonorrhoeae
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191819/
https://www.ncbi.nlm.nih.gov/pubmed/37198361
http://dx.doi.org/10.1007/s00216-023-04734-3
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