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A biomarker discovery of acute myocardial infarction using feature selection and machine learning
Acute myocardial infarction (AMI) or heart attack is a significant global health threat and one of the leading causes of death. The evolution of machine learning has greatly revamped the risk stratification and death prediction of AMI. In this study, an integrated feature selection and machine learn...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191821/ https://www.ncbi.nlm.nih.gov/pubmed/37199891 http://dx.doi.org/10.1007/s11517-023-02841-y |
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author | Mohd Faizal, Aizatul Shafiqah Hon, Wei Yin Thevarajah, T. Malathi Khor, Sook Mei Chang, Siow-Wee |
author_facet | Mohd Faizal, Aizatul Shafiqah Hon, Wei Yin Thevarajah, T. Malathi Khor, Sook Mei Chang, Siow-Wee |
author_sort | Mohd Faizal, Aizatul Shafiqah |
collection | PubMed |
description | Acute myocardial infarction (AMI) or heart attack is a significant global health threat and one of the leading causes of death. The evolution of machine learning has greatly revamped the risk stratification and death prediction of AMI. In this study, an integrated feature selection and machine learning approach was used to identify potential biomarkers for early detection and treatment of AMI. First, feature selection was conducted and evaluated before all classification tasks with machine learning. Full classification models (using all 62 features) and reduced classification models (using various feature selection methods ranging from 5 to 30 features) were built and evaluated using six machine learning classification algorithms. The results showed that the reduced models performed generally better (mean AUPRC via random forest (RF) algorithm for recursive feature elimination (RFE) method ranges from 0.8048 to 0.8260, while for random forest importance (RFI) method, it ranges from 0.8301 to 0.8505) than the full models (mean AUPRC via RF: 0.8044). The most notable finding of this study was the identification of a five-feature model that included cardiac troponin I, HDL cholesterol, HbA1c, anion gap, and albumin, which had achieved comparable results (mean AUPRC via RF: 0.8462) as to the models that containing more features. These five features were proven by the previous studies as significant risk factors for AMI or cardiovascular disease and could be used as potential biomarkers to predict the prognosis of AMI patients. From the medical point of view, fewer features for diagnosis or prognosis could reduce the cost and time of a patient as lesser clinical and pathological tests are needed. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11517-023-02841-y. |
format | Online Article Text |
id | pubmed-10191821 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-101918212023-05-19 A biomarker discovery of acute myocardial infarction using feature selection and machine learning Mohd Faizal, Aizatul Shafiqah Hon, Wei Yin Thevarajah, T. Malathi Khor, Sook Mei Chang, Siow-Wee Med Biol Eng Comput Original Article Acute myocardial infarction (AMI) or heart attack is a significant global health threat and one of the leading causes of death. The evolution of machine learning has greatly revamped the risk stratification and death prediction of AMI. In this study, an integrated feature selection and machine learning approach was used to identify potential biomarkers for early detection and treatment of AMI. First, feature selection was conducted and evaluated before all classification tasks with machine learning. Full classification models (using all 62 features) and reduced classification models (using various feature selection methods ranging from 5 to 30 features) were built and evaluated using six machine learning classification algorithms. The results showed that the reduced models performed generally better (mean AUPRC via random forest (RF) algorithm for recursive feature elimination (RFE) method ranges from 0.8048 to 0.8260, while for random forest importance (RFI) method, it ranges from 0.8301 to 0.8505) than the full models (mean AUPRC via RF: 0.8044). The most notable finding of this study was the identification of a five-feature model that included cardiac troponin I, HDL cholesterol, HbA1c, anion gap, and albumin, which had achieved comparable results (mean AUPRC via RF: 0.8462) as to the models that containing more features. These five features were proven by the previous studies as significant risk factors for AMI or cardiovascular disease and could be used as potential biomarkers to predict the prognosis of AMI patients. From the medical point of view, fewer features for diagnosis or prognosis could reduce the cost and time of a patient as lesser clinical and pathological tests are needed. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11517-023-02841-y. Springer Berlin Heidelberg 2023-05-18 /pmc/articles/PMC10191821/ /pubmed/37199891 http://dx.doi.org/10.1007/s11517-023-02841-y Text en © International Federation for Medical and Biological Engineering 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Article Mohd Faizal, Aizatul Shafiqah Hon, Wei Yin Thevarajah, T. Malathi Khor, Sook Mei Chang, Siow-Wee A biomarker discovery of acute myocardial infarction using feature selection and machine learning |
title | A biomarker discovery of acute myocardial infarction using feature selection and machine learning |
title_full | A biomarker discovery of acute myocardial infarction using feature selection and machine learning |
title_fullStr | A biomarker discovery of acute myocardial infarction using feature selection and machine learning |
title_full_unstemmed | A biomarker discovery of acute myocardial infarction using feature selection and machine learning |
title_short | A biomarker discovery of acute myocardial infarction using feature selection and machine learning |
title_sort | biomarker discovery of acute myocardial infarction using feature selection and machine learning |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10191821/ https://www.ncbi.nlm.nih.gov/pubmed/37199891 http://dx.doi.org/10.1007/s11517-023-02841-y |
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