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Machine learning of spectra-property relationship for imperfect and small chemistry data

Machine learning (ML) is causing profound changes to chemical research through its powerful statistical and mathematical methodological capabilities. However, the nature of chemistry experiments often sets very high hurdles to collect high-quality data that are deficiency free, contradicting the nee...

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Autores principales: Chong, Yuanyuan, Huo, Yaoyuan, Jiang, Shuang, Wang, Xijun, Zhang, Baichen, Liu, Tianfu, Chen, Xin, Han, TianTian, Smith, Pieter Ernst Scholtz, Wang, Song, Jiang, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10193941/
https://www.ncbi.nlm.nih.gov/pubmed/37155896
http://dx.doi.org/10.1073/pnas.2220789120
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author Chong, Yuanyuan
Huo, Yaoyuan
Jiang, Shuang
Wang, Xijun
Zhang, Baichen
Liu, Tianfu
Chen, Xin
Han, TianTian
Smith, Pieter Ernst Scholtz
Wang, Song
Jiang, Jun
author_facet Chong, Yuanyuan
Huo, Yaoyuan
Jiang, Shuang
Wang, Xijun
Zhang, Baichen
Liu, Tianfu
Chen, Xin
Han, TianTian
Smith, Pieter Ernst Scholtz
Wang, Song
Jiang, Jun
author_sort Chong, Yuanyuan
collection PubMed
description Machine learning (ML) is causing profound changes to chemical research through its powerful statistical and mathematical methodological capabilities. However, the nature of chemistry experiments often sets very high hurdles to collect high-quality data that are deficiency free, contradicting the need of ML to learn from big data. Even worse, the black-box nature of most ML methods requires more abundant data to ensure good transferability. Herein, we combine physics-based spectral descriptors with a symbolic regression method to establish interpretable spectra–property relationship. Using the machine-learned mathematical formulas, we have predicted the adsorption energy and charge transfer of the CO-adsorbed Cu-based MOF systems from their infrared and Raman spectra. The explicit prediction models are robust, allowing them to be transferrable to small and low-quality dataset containing partial errors. Surprisingly, they can be used to identify and clean error data, which are common data scenarios in real experiments. Such robust learning protocol will significantly enhance the applicability of machine-learned spectroscopy for chemical science.
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spelling pubmed-101939412023-11-08 Machine learning of spectra-property relationship for imperfect and small chemistry data Chong, Yuanyuan Huo, Yaoyuan Jiang, Shuang Wang, Xijun Zhang, Baichen Liu, Tianfu Chen, Xin Han, TianTian Smith, Pieter Ernst Scholtz Wang, Song Jiang, Jun Proc Natl Acad Sci U S A Physical Sciences Machine learning (ML) is causing profound changes to chemical research through its powerful statistical and mathematical methodological capabilities. However, the nature of chemistry experiments often sets very high hurdles to collect high-quality data that are deficiency free, contradicting the need of ML to learn from big data. Even worse, the black-box nature of most ML methods requires more abundant data to ensure good transferability. Herein, we combine physics-based spectral descriptors with a symbolic regression method to establish interpretable spectra–property relationship. Using the machine-learned mathematical formulas, we have predicted the adsorption energy and charge transfer of the CO-adsorbed Cu-based MOF systems from their infrared and Raman spectra. The explicit prediction models are robust, allowing them to be transferrable to small and low-quality dataset containing partial errors. Surprisingly, they can be used to identify and clean error data, which are common data scenarios in real experiments. Such robust learning protocol will significantly enhance the applicability of machine-learned spectroscopy for chemical science. National Academy of Sciences 2023-05-08 2023-05-16 /pmc/articles/PMC10193941/ /pubmed/37155896 http://dx.doi.org/10.1073/pnas.2220789120 Text en Copyright © 2023 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Chong, Yuanyuan
Huo, Yaoyuan
Jiang, Shuang
Wang, Xijun
Zhang, Baichen
Liu, Tianfu
Chen, Xin
Han, TianTian
Smith, Pieter Ernst Scholtz
Wang, Song
Jiang, Jun
Machine learning of spectra-property relationship for imperfect and small chemistry data
title Machine learning of spectra-property relationship for imperfect and small chemistry data
title_full Machine learning of spectra-property relationship for imperfect and small chemistry data
title_fullStr Machine learning of spectra-property relationship for imperfect and small chemistry data
title_full_unstemmed Machine learning of spectra-property relationship for imperfect and small chemistry data
title_short Machine learning of spectra-property relationship for imperfect and small chemistry data
title_sort machine learning of spectra-property relationship for imperfect and small chemistry data
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10193941/
https://www.ncbi.nlm.nih.gov/pubmed/37155896
http://dx.doi.org/10.1073/pnas.2220789120
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