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Machine learning of spectra-property relationship for imperfect and small chemistry data
Machine learning (ML) is causing profound changes to chemical research through its powerful statistical and mathematical methodological capabilities. However, the nature of chemistry experiments often sets very high hurdles to collect high-quality data that are deficiency free, contradicting the nee...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10193941/ https://www.ncbi.nlm.nih.gov/pubmed/37155896 http://dx.doi.org/10.1073/pnas.2220789120 |
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author | Chong, Yuanyuan Huo, Yaoyuan Jiang, Shuang Wang, Xijun Zhang, Baichen Liu, Tianfu Chen, Xin Han, TianTian Smith, Pieter Ernst Scholtz Wang, Song Jiang, Jun |
author_facet | Chong, Yuanyuan Huo, Yaoyuan Jiang, Shuang Wang, Xijun Zhang, Baichen Liu, Tianfu Chen, Xin Han, TianTian Smith, Pieter Ernst Scholtz Wang, Song Jiang, Jun |
author_sort | Chong, Yuanyuan |
collection | PubMed |
description | Machine learning (ML) is causing profound changes to chemical research through its powerful statistical and mathematical methodological capabilities. However, the nature of chemistry experiments often sets very high hurdles to collect high-quality data that are deficiency free, contradicting the need of ML to learn from big data. Even worse, the black-box nature of most ML methods requires more abundant data to ensure good transferability. Herein, we combine physics-based spectral descriptors with a symbolic regression method to establish interpretable spectra–property relationship. Using the machine-learned mathematical formulas, we have predicted the adsorption energy and charge transfer of the CO-adsorbed Cu-based MOF systems from their infrared and Raman spectra. The explicit prediction models are robust, allowing them to be transferrable to small and low-quality dataset containing partial errors. Surprisingly, they can be used to identify and clean error data, which are common data scenarios in real experiments. Such robust learning protocol will significantly enhance the applicability of machine-learned spectroscopy for chemical science. |
format | Online Article Text |
id | pubmed-10193941 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-101939412023-11-08 Machine learning of spectra-property relationship for imperfect and small chemistry data Chong, Yuanyuan Huo, Yaoyuan Jiang, Shuang Wang, Xijun Zhang, Baichen Liu, Tianfu Chen, Xin Han, TianTian Smith, Pieter Ernst Scholtz Wang, Song Jiang, Jun Proc Natl Acad Sci U S A Physical Sciences Machine learning (ML) is causing profound changes to chemical research through its powerful statistical and mathematical methodological capabilities. However, the nature of chemistry experiments often sets very high hurdles to collect high-quality data that are deficiency free, contradicting the need of ML to learn from big data. Even worse, the black-box nature of most ML methods requires more abundant data to ensure good transferability. Herein, we combine physics-based spectral descriptors with a symbolic regression method to establish interpretable spectra–property relationship. Using the machine-learned mathematical formulas, we have predicted the adsorption energy and charge transfer of the CO-adsorbed Cu-based MOF systems from their infrared and Raman spectra. The explicit prediction models are robust, allowing them to be transferrable to small and low-quality dataset containing partial errors. Surprisingly, they can be used to identify and clean error data, which are common data scenarios in real experiments. Such robust learning protocol will significantly enhance the applicability of machine-learned spectroscopy for chemical science. National Academy of Sciences 2023-05-08 2023-05-16 /pmc/articles/PMC10193941/ /pubmed/37155896 http://dx.doi.org/10.1073/pnas.2220789120 Text en Copyright © 2023 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Physical Sciences Chong, Yuanyuan Huo, Yaoyuan Jiang, Shuang Wang, Xijun Zhang, Baichen Liu, Tianfu Chen, Xin Han, TianTian Smith, Pieter Ernst Scholtz Wang, Song Jiang, Jun Machine learning of spectra-property relationship for imperfect and small chemistry data |
title | Machine learning of spectra-property relationship for imperfect and small chemistry data |
title_full | Machine learning of spectra-property relationship for imperfect and small chemistry data |
title_fullStr | Machine learning of spectra-property relationship for imperfect and small chemistry data |
title_full_unstemmed | Machine learning of spectra-property relationship for imperfect and small chemistry data |
title_short | Machine learning of spectra-property relationship for imperfect and small chemistry data |
title_sort | machine learning of spectra-property relationship for imperfect and small chemistry data |
topic | Physical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10193941/ https://www.ncbi.nlm.nih.gov/pubmed/37155896 http://dx.doi.org/10.1073/pnas.2220789120 |
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