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Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3
Here, we report the genome sequence of a double-stranded DNA siphovirus, vB_Pae_LC3I3 infective for P. aeruginosa PA14. Phage vB_Pae_LC3I3 was identified as a linear double-stranded DNA phage of 49,926 bp with 59% G+C content. The vB_Pae_LC3I3 genome contains 78 open reading frames, and the function...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10194125/ https://www.ncbi.nlm.nih.gov/pubmed/36288775 http://dx.doi.org/10.1016/j.virusres.2022.198978 |
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author | Xuan, Guanhua Kong, Jiuna Wang, Yinfeng Lin, Hong Wang, Jingxue |
author_facet | Xuan, Guanhua Kong, Jiuna Wang, Yinfeng Lin, Hong Wang, Jingxue |
author_sort | Xuan, Guanhua |
collection | PubMed |
description | Here, we report the genome sequence of a double-stranded DNA siphovirus, vB_Pae_LC3I3 infective for P. aeruginosa PA14. Phage vB_Pae_LC3I3 was identified as a linear double-stranded DNA phage of 49,926 bp with 59% G+C content. The vB_Pae_LC3I3 genome contains 78 open reading frames, and the function of 22 ORFs can be predicted. Genome analysis confirmed the lysogenic nature of this phage, which encodes the typical lysogen-related integrase and CI/Cro regulator. One-step growth curve revealed that the latent period of phage vB_Pae_LC3I3 lasted for 30 min. And vB_Pae_LC3I3 showed good temperature stability and pH stability. Based on electron microscopy, phylogenetic, and comparative genomic analyses, this novel Pseudomonas temperate phage represents a novel unassigned siphoviruses cluster. The study of phage vB_Pae_LC3I3 will provide basic information for further research on treatment of P. aeruginosa infections. |
format | Online Article Text |
id | pubmed-10194125 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-101941252023-05-19 Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 Xuan, Guanhua Kong, Jiuna Wang, Yinfeng Lin, Hong Wang, Jingxue Virus Res Article Here, we report the genome sequence of a double-stranded DNA siphovirus, vB_Pae_LC3I3 infective for P. aeruginosa PA14. Phage vB_Pae_LC3I3 was identified as a linear double-stranded DNA phage of 49,926 bp with 59% G+C content. The vB_Pae_LC3I3 genome contains 78 open reading frames, and the function of 22 ORFs can be predicted. Genome analysis confirmed the lysogenic nature of this phage, which encodes the typical lysogen-related integrase and CI/Cro regulator. One-step growth curve revealed that the latent period of phage vB_Pae_LC3I3 lasted for 30 min. And vB_Pae_LC3I3 showed good temperature stability and pH stability. Based on electron microscopy, phylogenetic, and comparative genomic analyses, this novel Pseudomonas temperate phage represents a novel unassigned siphoviruses cluster. The study of phage vB_Pae_LC3I3 will provide basic information for further research on treatment of P. aeruginosa infections. Elsevier 2022-10-23 /pmc/articles/PMC10194125/ /pubmed/36288775 http://dx.doi.org/10.1016/j.virusres.2022.198978 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Xuan, Guanhua Kong, Jiuna Wang, Yinfeng Lin, Hong Wang, Jingxue Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 |
title | Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 |
title_full | Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 |
title_fullStr | Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 |
title_full_unstemmed | Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 |
title_short | Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 |
title_sort | characterization of the newly isolated pseudomonas phage vb_pae_lc3i3 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10194125/ https://www.ncbi.nlm.nih.gov/pubmed/36288775 http://dx.doi.org/10.1016/j.virusres.2022.198978 |
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