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Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3

Here, we report the genome sequence of a double-stranded DNA siphovirus, vB_Pae_LC3I3 infective for P. aeruginosa PA14. Phage vB_Pae_LC3I3 was identified as a linear double-stranded DNA phage of 49,926 bp with 59% G+C content. The vB_Pae_LC3I3 genome contains 78 open reading frames, and the function...

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Detalles Bibliográficos
Autores principales: Xuan, Guanhua, Kong, Jiuna, Wang, Yinfeng, Lin, Hong, Wang, Jingxue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10194125/
https://www.ncbi.nlm.nih.gov/pubmed/36288775
http://dx.doi.org/10.1016/j.virusres.2022.198978
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author Xuan, Guanhua
Kong, Jiuna
Wang, Yinfeng
Lin, Hong
Wang, Jingxue
author_facet Xuan, Guanhua
Kong, Jiuna
Wang, Yinfeng
Lin, Hong
Wang, Jingxue
author_sort Xuan, Guanhua
collection PubMed
description Here, we report the genome sequence of a double-stranded DNA siphovirus, vB_Pae_LC3I3 infective for P. aeruginosa PA14. Phage vB_Pae_LC3I3 was identified as a linear double-stranded DNA phage of 49,926 bp with 59% G+C content. The vB_Pae_LC3I3 genome contains 78 open reading frames, and the function of 22 ORFs can be predicted. Genome analysis confirmed the lysogenic nature of this phage, which encodes the typical lysogen-related integrase and CI/Cro regulator. One-step growth curve revealed that the latent period of phage vB_Pae_LC3I3 lasted for 30 min. And vB_Pae_LC3I3 showed good temperature stability and pH stability. Based on electron microscopy, phylogenetic, and comparative genomic analyses, this novel Pseudomonas temperate phage represents a novel unassigned siphoviruses cluster. The study of phage vB_Pae_LC3I3 will provide basic information for further research on treatment of P. aeruginosa infections.
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spelling pubmed-101941252023-05-19 Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3 Xuan, Guanhua Kong, Jiuna Wang, Yinfeng Lin, Hong Wang, Jingxue Virus Res Article Here, we report the genome sequence of a double-stranded DNA siphovirus, vB_Pae_LC3I3 infective for P. aeruginosa PA14. Phage vB_Pae_LC3I3 was identified as a linear double-stranded DNA phage of 49,926 bp with 59% G+C content. The vB_Pae_LC3I3 genome contains 78 open reading frames, and the function of 22 ORFs can be predicted. Genome analysis confirmed the lysogenic nature of this phage, which encodes the typical lysogen-related integrase and CI/Cro regulator. One-step growth curve revealed that the latent period of phage vB_Pae_LC3I3 lasted for 30 min. And vB_Pae_LC3I3 showed good temperature stability and pH stability. Based on electron microscopy, phylogenetic, and comparative genomic analyses, this novel Pseudomonas temperate phage represents a novel unassigned siphoviruses cluster. The study of phage vB_Pae_LC3I3 will provide basic information for further research on treatment of P. aeruginosa infections. Elsevier 2022-10-23 /pmc/articles/PMC10194125/ /pubmed/36288775 http://dx.doi.org/10.1016/j.virusres.2022.198978 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Xuan, Guanhua
Kong, Jiuna
Wang, Yinfeng
Lin, Hong
Wang, Jingxue
Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3
title Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3
title_full Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3
title_fullStr Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3
title_full_unstemmed Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3
title_short Characterization of the newly isolated Pseudomonas phage vB_Pae_LC3I3
title_sort characterization of the newly isolated pseudomonas phage vb_pae_lc3i3
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10194125/
https://www.ncbi.nlm.nih.gov/pubmed/36288775
http://dx.doi.org/10.1016/j.virusres.2022.198978
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