Cargando…

Electronic surveillance of patient safety events using natural language processing

OBJECTIVE: We describe our approach to surveillance of reportable safety events captured in hospital data including free-text clinical notes. We hypothesize that a) some patient safety events are documented only in the clinical notes and not in any other accessible source; and b) large-scale abstrac...

Descripción completa

Detalles Bibliográficos
Autores principales: Ozonoff, Al, Milliren, Carly E, Fournier, Kerri, Welcher, Jennifer, Landschaft, Assaf, Samnaliev, Mihail, Saluvan, Mehmet, Waltzman, Mark, Kimia, Amir A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10195078/
https://www.ncbi.nlm.nih.gov/pubmed/36330784
http://dx.doi.org/10.1177/14604582221132429
_version_ 1785044149301411840
author Ozonoff, Al
Milliren, Carly E
Fournier, Kerri
Welcher, Jennifer
Landschaft, Assaf
Samnaliev, Mihail
Saluvan, Mehmet
Waltzman, Mark
Kimia, Amir A
author_facet Ozonoff, Al
Milliren, Carly E
Fournier, Kerri
Welcher, Jennifer
Landschaft, Assaf
Samnaliev, Mihail
Saluvan, Mehmet
Waltzman, Mark
Kimia, Amir A
author_sort Ozonoff, Al
collection PubMed
description OBJECTIVE: We describe our approach to surveillance of reportable safety events captured in hospital data including free-text clinical notes. We hypothesize that a) some patient safety events are documented only in the clinical notes and not in any other accessible source; and b) large-scale abstraction of event data from clinical notes is feasible. MATERIALS AND METHODS: We use regular expressions to generate a training data set for a machine learning model and apply this model to the full set of clinical notes and conduct further review to identify safety events of interest. We demonstrate this approach on peripheral intravenous (PIV) infiltrations and extravasations (PIVIEs). RESULTS: During Phase 1, we collected 21,362 clinical notes, of which 2342 were reviewed. We identified 125 PIV events, of which 44 cases (35%) were not captured by other patient safety systems. During Phase 2, we collected 60,735 clinical notes and identified 440 infiltrate events. Our classifier demonstrated accuracy above 90%. CONCLUSION: Our method to identify safety events from the free text of clinical documentation offers a feasible and scalable approach to enhance existing patient safety systems. Expert reviewers, using a machine learning model, can conduct routine surveillance of patient safety events.
format Online
Article
Text
id pubmed-10195078
institution National Center for Biotechnology Information
language English
publishDate 2022
record_format MEDLINE/PubMed
spelling pubmed-101950782023-05-18 Electronic surveillance of patient safety events using natural language processing Ozonoff, Al Milliren, Carly E Fournier, Kerri Welcher, Jennifer Landschaft, Assaf Samnaliev, Mihail Saluvan, Mehmet Waltzman, Mark Kimia, Amir A Health Informatics J Article OBJECTIVE: We describe our approach to surveillance of reportable safety events captured in hospital data including free-text clinical notes. We hypothesize that a) some patient safety events are documented only in the clinical notes and not in any other accessible source; and b) large-scale abstraction of event data from clinical notes is feasible. MATERIALS AND METHODS: We use regular expressions to generate a training data set for a machine learning model and apply this model to the full set of clinical notes and conduct further review to identify safety events of interest. We demonstrate this approach on peripheral intravenous (PIV) infiltrations and extravasations (PIVIEs). RESULTS: During Phase 1, we collected 21,362 clinical notes, of which 2342 were reviewed. We identified 125 PIV events, of which 44 cases (35%) were not captured by other patient safety systems. During Phase 2, we collected 60,735 clinical notes and identified 440 infiltrate events. Our classifier demonstrated accuracy above 90%. CONCLUSION: Our method to identify safety events from the free text of clinical documentation offers a feasible and scalable approach to enhance existing patient safety systems. Expert reviewers, using a machine learning model, can conduct routine surveillance of patient safety events. 2022 /pmc/articles/PMC10195078/ /pubmed/36330784 http://dx.doi.org/10.1177/14604582221132429 Text en https://creativecommons.org/licenses/by-nc/4.0/Creative Commons Non Commercial CC BY-NC: This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). Article reuse guidelines: sagepub.com/journals-permissions (https://uk.sagepub.com/en-gb/eur/journals-permissions)
spellingShingle Article
Ozonoff, Al
Milliren, Carly E
Fournier, Kerri
Welcher, Jennifer
Landschaft, Assaf
Samnaliev, Mihail
Saluvan, Mehmet
Waltzman, Mark
Kimia, Amir A
Electronic surveillance of patient safety events using natural language processing
title Electronic surveillance of patient safety events using natural language processing
title_full Electronic surveillance of patient safety events using natural language processing
title_fullStr Electronic surveillance of patient safety events using natural language processing
title_full_unstemmed Electronic surveillance of patient safety events using natural language processing
title_short Electronic surveillance of patient safety events using natural language processing
title_sort electronic surveillance of patient safety events using natural language processing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10195078/
https://www.ncbi.nlm.nih.gov/pubmed/36330784
http://dx.doi.org/10.1177/14604582221132429
work_keys_str_mv AT ozonoffal electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT millirencarlye electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT fournierkerri electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT welcherjennifer electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT landschaftassaf electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT samnalievmihail electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT saluvanmehmet electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT waltzmanmark electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing
AT kimiaamira electronicsurveillanceofpatientsafetyeventsusingnaturallanguageprocessing