Cargando…

Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking

INTRODUCTION: Fatigue has attracted broad attention in recent years due to its high morbidity rates. The use of functional foods to relieve fatigue-associated symptoms is becoming increasingly popular and has achieved relatively good results. In this study, network pharmacology and molecular docking...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Yi, Ma, Yixuan, Cao, Jinguo, Xie, Rui, Chen, Feng, Hu, Wen, Huang, Yushan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10196032/
https://www.ncbi.nlm.nih.gov/pubmed/37215213
http://dx.doi.org/10.3389/fnut.2023.1131972
_version_ 1785044256903135232
author Wu, Yi
Ma, Yixuan
Cao, Jinguo
Xie, Rui
Chen, Feng
Hu, Wen
Huang, Yushan
author_facet Wu, Yi
Ma, Yixuan
Cao, Jinguo
Xie, Rui
Chen, Feng
Hu, Wen
Huang, Yushan
author_sort Wu, Yi
collection PubMed
description INTRODUCTION: Fatigue has attracted broad attention in recent years due to its high morbidity rates. The use of functional foods to relieve fatigue-associated symptoms is becoming increasingly popular and has achieved relatively good results. In this study, network pharmacology and molecular docking strategies were used to establish the material basis and mechanisms of Chinese herbal compounds in fatigue treatment. According to traditional medicine theories and relevant guidance documents published by the Chinese Ministry of Health, four herbal medicines, including Eucommia ulmoides Oliver bark, Eucommia ulmoides Oliver male flower, Panax notoginseng, and Syzygium aromaticum (EEPS), were selected to constitute the anti-fatigue herbal compound that may be suitable as functional food ingredients. METHODS: The major active ingredients in EEPS were identified via comprehensive literature search and Traditional Chinese Medicine Systems Pharmacology database search. Corresponding targets for these ingredients were predicted using SwissTargetPrediction. The network was constructed using Cytoscape 3.9.1 to obtain key ingredients. Prediction of absorption, distribution, metabolism, excretion and toxicity properties was performed using the ADMETIab 2.0 database. The anti-fatigue targets were retrieved from GeneCards v5.13, OMIM, TTD and DisGeNET 7.0 databases. Then, the potential targets of EEPS in fatigue treatment were screened through a Venn diagram. A protein–protein interaction (PPI) network of these overlapping targets was constructed, and the hub targets in the network selected through topological screening. Gene Ontology and KEGG pathway enrichment analyses were performed using the DAVID database and the bioinformatics online platform. Finally, AutoDock tools were used to verify the binding capacity between the key active ingredients and the core targets. RESULTS AND DISCUSSION: This study identified the active ingredients and potential molecular mechanisms of EEPS in fatigue treatment, which will provide a foundation for future research on applications of herbal medicines in the functional food industry.
format Online
Article
Text
id pubmed-10196032
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-101960322023-05-20 Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking Wu, Yi Ma, Yixuan Cao, Jinguo Xie, Rui Chen, Feng Hu, Wen Huang, Yushan Front Nutr Nutrition INTRODUCTION: Fatigue has attracted broad attention in recent years due to its high morbidity rates. The use of functional foods to relieve fatigue-associated symptoms is becoming increasingly popular and has achieved relatively good results. In this study, network pharmacology and molecular docking strategies were used to establish the material basis and mechanisms of Chinese herbal compounds in fatigue treatment. According to traditional medicine theories and relevant guidance documents published by the Chinese Ministry of Health, four herbal medicines, including Eucommia ulmoides Oliver bark, Eucommia ulmoides Oliver male flower, Panax notoginseng, and Syzygium aromaticum (EEPS), were selected to constitute the anti-fatigue herbal compound that may be suitable as functional food ingredients. METHODS: The major active ingredients in EEPS were identified via comprehensive literature search and Traditional Chinese Medicine Systems Pharmacology database search. Corresponding targets for these ingredients were predicted using SwissTargetPrediction. The network was constructed using Cytoscape 3.9.1 to obtain key ingredients. Prediction of absorption, distribution, metabolism, excretion and toxicity properties was performed using the ADMETIab 2.0 database. The anti-fatigue targets were retrieved from GeneCards v5.13, OMIM, TTD and DisGeNET 7.0 databases. Then, the potential targets of EEPS in fatigue treatment were screened through a Venn diagram. A protein–protein interaction (PPI) network of these overlapping targets was constructed, and the hub targets in the network selected through topological screening. Gene Ontology and KEGG pathway enrichment analyses were performed using the DAVID database and the bioinformatics online platform. Finally, AutoDock tools were used to verify the binding capacity between the key active ingredients and the core targets. RESULTS AND DISCUSSION: This study identified the active ingredients and potential molecular mechanisms of EEPS in fatigue treatment, which will provide a foundation for future research on applications of herbal medicines in the functional food industry. Frontiers Media S.A. 2023-05-05 /pmc/articles/PMC10196032/ /pubmed/37215213 http://dx.doi.org/10.3389/fnut.2023.1131972 Text en Copyright © 2023 Wu, Ma, Cao, Xie, Chen, Hu and Huang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Nutrition
Wu, Yi
Ma, Yixuan
Cao, Jinguo
Xie, Rui
Chen, Feng
Hu, Wen
Huang, Yushan
Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking
title Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking
title_full Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking
title_fullStr Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking
title_full_unstemmed Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking
title_short Feasibility study on the use of “Qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking
title_sort feasibility study on the use of “qi-tonifying medicine compound” as an anti-fatigue functional food ingredient based on network pharmacology and molecular docking
topic Nutrition
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10196032/
https://www.ncbi.nlm.nih.gov/pubmed/37215213
http://dx.doi.org/10.3389/fnut.2023.1131972
work_keys_str_mv AT wuyi feasibilitystudyontheuseofqitonifyingmedicinecompoundasanantifatiguefunctionalfoodingredientbasedonnetworkpharmacologyandmoleculardocking
AT mayixuan feasibilitystudyontheuseofqitonifyingmedicinecompoundasanantifatiguefunctionalfoodingredientbasedonnetworkpharmacologyandmoleculardocking
AT caojinguo feasibilitystudyontheuseofqitonifyingmedicinecompoundasanantifatiguefunctionalfoodingredientbasedonnetworkpharmacologyandmoleculardocking
AT xierui feasibilitystudyontheuseofqitonifyingmedicinecompoundasanantifatiguefunctionalfoodingredientbasedonnetworkpharmacologyandmoleculardocking
AT chenfeng feasibilitystudyontheuseofqitonifyingmedicinecompoundasanantifatiguefunctionalfoodingredientbasedonnetworkpharmacologyandmoleculardocking
AT huwen feasibilitystudyontheuseofqitonifyingmedicinecompoundasanantifatiguefunctionalfoodingredientbasedonnetworkpharmacologyandmoleculardocking
AT huangyushan feasibilitystudyontheuseofqitonifyingmedicinecompoundasanantifatiguefunctionalfoodingredientbasedonnetworkpharmacologyandmoleculardocking