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Interpretable deep learning survival predictive tool for small cell lung cancer

BACKGROUND: Small cell lung cancer (SCLC) is an aggressive and almost universally lethal neoplasm. There is no accurate predictive method for its prognosis. Artificial intelligence deep learning may bring new hope. METHODS: By searching the Surveillance, Epidemiology, and End Results database (SEER)...

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Autores principales: Zhang, Dongrui, Lu, Baohua, Liang, Bowen, Li, Bo, Wang, Ziyu, Gu, Meng, Jia, Wei, Pan, Yuanming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10196231/
https://www.ncbi.nlm.nih.gov/pubmed/37213271
http://dx.doi.org/10.3389/fonc.2023.1162181
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author Zhang, Dongrui
Lu, Baohua
Liang, Bowen
Li, Bo
Wang, Ziyu
Gu, Meng
Jia, Wei
Pan, Yuanming
author_facet Zhang, Dongrui
Lu, Baohua
Liang, Bowen
Li, Bo
Wang, Ziyu
Gu, Meng
Jia, Wei
Pan, Yuanming
author_sort Zhang, Dongrui
collection PubMed
description BACKGROUND: Small cell lung cancer (SCLC) is an aggressive and almost universally lethal neoplasm. There is no accurate predictive method for its prognosis. Artificial intelligence deep learning may bring new hope. METHODS: By searching the Surveillance, Epidemiology, and End Results database (SEER), 21,093 patients’ clinical data were eventually included. Data were then divided into two groups (train dataset/test dataset). The train dataset (diagnosed in 2010–2014, N = 17,296) was utilized to conduct a deep learning survival model, validated by itself and the test dataset (diagnosed in 2015, N = 3,797) in parallel. According to clinical experience, age, sex, tumor site, T, N, M stage (7th American Joint Committee on Cancer TNM stage), tumor size, surgery, chemotherapy, radiotherapy, and history of malignancy were chosen as predictive clinical features. The C-index was the main indicator to evaluate model performance. RESULTS: The predictive model had a 0.7181 C-index (95% confidence intervals, CIs, 0.7174–0.7187) in the train dataset and a 0.7208 C-index (95% CIs, 0.7202–0.7215) in the test dataset. These indicated that it had a reliable predictive value on OS for SCLC, so it was then packaged as a Windows software which is free for doctors, researchers, and patients to use. CONCLUSION: The interpretable deep learning survival predictive tool for small cell lung cancer developed by this study had a reliable predictive value on their overall survival. More biomarkers may help improve the prognostic predictive performance of small cell lung cancer.
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spelling pubmed-101962312023-05-20 Interpretable deep learning survival predictive tool for small cell lung cancer Zhang, Dongrui Lu, Baohua Liang, Bowen Li, Bo Wang, Ziyu Gu, Meng Jia, Wei Pan, Yuanming Front Oncol Oncology BACKGROUND: Small cell lung cancer (SCLC) is an aggressive and almost universally lethal neoplasm. There is no accurate predictive method for its prognosis. Artificial intelligence deep learning may bring new hope. METHODS: By searching the Surveillance, Epidemiology, and End Results database (SEER), 21,093 patients’ clinical data were eventually included. Data were then divided into two groups (train dataset/test dataset). The train dataset (diagnosed in 2010–2014, N = 17,296) was utilized to conduct a deep learning survival model, validated by itself and the test dataset (diagnosed in 2015, N = 3,797) in parallel. According to clinical experience, age, sex, tumor site, T, N, M stage (7th American Joint Committee on Cancer TNM stage), tumor size, surgery, chemotherapy, radiotherapy, and history of malignancy were chosen as predictive clinical features. The C-index was the main indicator to evaluate model performance. RESULTS: The predictive model had a 0.7181 C-index (95% confidence intervals, CIs, 0.7174–0.7187) in the train dataset and a 0.7208 C-index (95% CIs, 0.7202–0.7215) in the test dataset. These indicated that it had a reliable predictive value on OS for SCLC, so it was then packaged as a Windows software which is free for doctors, researchers, and patients to use. CONCLUSION: The interpretable deep learning survival predictive tool for small cell lung cancer developed by this study had a reliable predictive value on their overall survival. More biomarkers may help improve the prognostic predictive performance of small cell lung cancer. Frontiers Media S.A. 2023-05-05 /pmc/articles/PMC10196231/ /pubmed/37213271 http://dx.doi.org/10.3389/fonc.2023.1162181 Text en Copyright © 2023 Zhang, Lu, Liang, Li, Wang, Gu, Jia and Pan https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Zhang, Dongrui
Lu, Baohua
Liang, Bowen
Li, Bo
Wang, Ziyu
Gu, Meng
Jia, Wei
Pan, Yuanming
Interpretable deep learning survival predictive tool for small cell lung cancer
title Interpretable deep learning survival predictive tool for small cell lung cancer
title_full Interpretable deep learning survival predictive tool for small cell lung cancer
title_fullStr Interpretable deep learning survival predictive tool for small cell lung cancer
title_full_unstemmed Interpretable deep learning survival predictive tool for small cell lung cancer
title_short Interpretable deep learning survival predictive tool for small cell lung cancer
title_sort interpretable deep learning survival predictive tool for small cell lung cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10196231/
https://www.ncbi.nlm.nih.gov/pubmed/37213271
http://dx.doi.org/10.3389/fonc.2023.1162181
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