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High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning

OBJECTIVE: Convolutional Neural Networks (CNNs) are promising for artifact detection in electroencephalography (EEG) data, but require large amounts of data. Despite increasing use of dry electrodes for EEG data acquisition, dry electrode EEG datasets are sparse. We aim to develop an algorithm for c...

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Autores principales: van Stigt, M.N., Groenendijk, E.A., Marquering, H.A., Coutinho, J.M., Potters, W.V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10196906/
https://www.ncbi.nlm.nih.gov/pubmed/37215683
http://dx.doi.org/10.1016/j.cnp.2023.04.002
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author van Stigt, M.N.
Groenendijk, E.A.
Marquering, H.A.
Coutinho, J.M.
Potters, W.V.
author_facet van Stigt, M.N.
Groenendijk, E.A.
Marquering, H.A.
Coutinho, J.M.
Potters, W.V.
author_sort van Stigt, M.N.
collection PubMed
description OBJECTIVE: Convolutional Neural Networks (CNNs) are promising for artifact detection in electroencephalography (EEG) data, but require large amounts of data. Despite increasing use of dry electrodes for EEG data acquisition, dry electrode EEG datasets are sparse. We aim to develop an algorithm for clean versus artifact dry electrode EEG data classification using transfer learning. METHODS: Dry electrode EEG data were acquired in 13 subjects while physiological and technical artifacts were induced. Data were per 2-second segment labeled as clean or artifact and split in an 80% train and 20% test set. With the train set, we fine-tuned a pre-trained CNN for clean versus artifact wet electrode EEG data classification using 3-fold cross validation. The three fine-tuned CNNs were combined in one final clean versus artifact classification algorithm, in which the majority vote was used for classification. We calculated accuracy, F1-score, precision, and recall of the pre-trained CNN and fine-tuned algorithm when applied to unseen test data. RESULTS: The algorithm was trained on 0.40 million and tested on 0.17 million overlapping EEG segments. The pre-trained CNN had a test accuracy of 65.6%. The fine-tuned clean versus artifact classification algorithm had an improved test accuracy of 90.7%, F1-score of 90.2%, precision of 89.1% and recall of 91.2%. CONCLUSIONS: Despite a relatively small dry electrode EEG dataset, transfer learning enabled development of a high performing CNN-based algorithm for clean versus artifact classification. SIGNIFICANCE: Development of CNNs for classification of dry electrode EEG data is challenging as dry electrode EEG datasets are sparse. Here, we show that transfer learning can be used to overcome this problem.
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spelling pubmed-101969062023-05-20 High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning van Stigt, M.N. Groenendijk, E.A. Marquering, H.A. Coutinho, J.M. Potters, W.V. Clin Neurophysiol Pract Research Paper OBJECTIVE: Convolutional Neural Networks (CNNs) are promising for artifact detection in electroencephalography (EEG) data, but require large amounts of data. Despite increasing use of dry electrodes for EEG data acquisition, dry electrode EEG datasets are sparse. We aim to develop an algorithm for clean versus artifact dry electrode EEG data classification using transfer learning. METHODS: Dry electrode EEG data were acquired in 13 subjects while physiological and technical artifacts were induced. Data were per 2-second segment labeled as clean or artifact and split in an 80% train and 20% test set. With the train set, we fine-tuned a pre-trained CNN for clean versus artifact wet electrode EEG data classification using 3-fold cross validation. The three fine-tuned CNNs were combined in one final clean versus artifact classification algorithm, in which the majority vote was used for classification. We calculated accuracy, F1-score, precision, and recall of the pre-trained CNN and fine-tuned algorithm when applied to unseen test data. RESULTS: The algorithm was trained on 0.40 million and tested on 0.17 million overlapping EEG segments. The pre-trained CNN had a test accuracy of 65.6%. The fine-tuned clean versus artifact classification algorithm had an improved test accuracy of 90.7%, F1-score of 90.2%, precision of 89.1% and recall of 91.2%. CONCLUSIONS: Despite a relatively small dry electrode EEG dataset, transfer learning enabled development of a high performing CNN-based algorithm for clean versus artifact classification. SIGNIFICANCE: Development of CNNs for classification of dry electrode EEG data is challenging as dry electrode EEG datasets are sparse. Here, we show that transfer learning can be used to overcome this problem. Elsevier 2023-04-25 /pmc/articles/PMC10196906/ /pubmed/37215683 http://dx.doi.org/10.1016/j.cnp.2023.04.002 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Paper
van Stigt, M.N.
Groenendijk, E.A.
Marquering, H.A.
Coutinho, J.M.
Potters, W.V.
High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning
title High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning
title_full High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning
title_fullStr High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning
title_full_unstemmed High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning
title_short High performance clean versus artifact dry electrode EEG data classification using Convolutional Neural Network transfer learning
title_sort high performance clean versus artifact dry electrode eeg data classification using convolutional neural network transfer learning
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10196906/
https://www.ncbi.nlm.nih.gov/pubmed/37215683
http://dx.doi.org/10.1016/j.cnp.2023.04.002
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