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Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma
BACKGROUND: Glioblastoma (GBM) is a common malignant brain tumor with poor prognosis and high mortality. Numerous reports have identified the correlation between aging and the prognosis of patients with GBM. The purpose of this study was to establish a prognostic model for GBM patients based on agin...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10197415/ https://www.ncbi.nlm.nih.gov/pubmed/37208656 http://dx.doi.org/10.1186/s12920-023-01538-3 |
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author | Mu, Jianhua Gong, Jianan Shi, Miao Zhang, Yinian |
author_facet | Mu, Jianhua Gong, Jianan Shi, Miao Zhang, Yinian |
author_sort | Mu, Jianhua |
collection | PubMed |
description | BACKGROUND: Glioblastoma (GBM) is a common malignant brain tumor with poor prognosis and high mortality. Numerous reports have identified the correlation between aging and the prognosis of patients with GBM. The purpose of this study was to establish a prognostic model for GBM patients based on aging-related gene (ARG) to help determine the prognosis of GBM patients. METHODS: 143 patients with GBM from The Cancer Genomic Atlas (TCGA), 218 patients with GBM from the Chinese Glioma Genomic Atlas (CGGA) of China and 50 patients from Gene Expression Omnibus (GEO) were included in the study. R software (V4.2.1) and bioinformatics statistical methods were used to develop prognostic models and study immune infiltration and mutation characteristics. RESULTS: Thirteen genes were screened out and used to establish the prognostic model finally, and the risk scores of the prognostic model was an independent factor (P < 0.001), which indicated a good prediction ability. In addition, there are significant differences in immune infiltration and mutation characteristics between the two groups with high and low risk scores. CONCLUSION: The prognostic model of GBM patients based on ARGs can predict the prognosis of GBM patients. However, this signature requires further investigation and validation in larger cohort studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-023-01538-3. |
format | Online Article Text |
id | pubmed-10197415 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-101974152023-05-20 Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma Mu, Jianhua Gong, Jianan Shi, Miao Zhang, Yinian BMC Med Genomics Research BACKGROUND: Glioblastoma (GBM) is a common malignant brain tumor with poor prognosis and high mortality. Numerous reports have identified the correlation between aging and the prognosis of patients with GBM. The purpose of this study was to establish a prognostic model for GBM patients based on aging-related gene (ARG) to help determine the prognosis of GBM patients. METHODS: 143 patients with GBM from The Cancer Genomic Atlas (TCGA), 218 patients with GBM from the Chinese Glioma Genomic Atlas (CGGA) of China and 50 patients from Gene Expression Omnibus (GEO) were included in the study. R software (V4.2.1) and bioinformatics statistical methods were used to develop prognostic models and study immune infiltration and mutation characteristics. RESULTS: Thirteen genes were screened out and used to establish the prognostic model finally, and the risk scores of the prognostic model was an independent factor (P < 0.001), which indicated a good prediction ability. In addition, there are significant differences in immune infiltration and mutation characteristics between the two groups with high and low risk scores. CONCLUSION: The prognostic model of GBM patients based on ARGs can predict the prognosis of GBM patients. However, this signature requires further investigation and validation in larger cohort studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-023-01538-3. BioMed Central 2023-05-19 /pmc/articles/PMC10197415/ /pubmed/37208656 http://dx.doi.org/10.1186/s12920-023-01538-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Mu, Jianhua Gong, Jianan Shi, Miao Zhang, Yinian Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma |
title | Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma |
title_full | Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma |
title_fullStr | Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma |
title_full_unstemmed | Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma |
title_short | Analysis and validation of aging-related genes in prognosis and immune function of glioblastoma |
title_sort | analysis and validation of aging-related genes in prognosis and immune function of glioblastoma |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10197415/ https://www.ncbi.nlm.nih.gov/pubmed/37208656 http://dx.doi.org/10.1186/s12920-023-01538-3 |
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