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Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity

Any reliable biomarker has to be specific, generalizable, and reproducible across individuals and contexts. The exact values of such a biomarker must represent similar health states in different individuals and at different times within the same individual to result in the minimum possible false-pos...

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Autores principales: Mangalam, Madhur, Sadri, Arash, Hayano, Junichiro, Watanabe, Eiichi, Kiyono, Ken, Kelty-Stephen, Damian G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cornell University 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10197736/
https://www.ncbi.nlm.nih.gov/pubmed/37214137
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author Mangalam, Madhur
Sadri, Arash
Hayano, Junichiro
Watanabe, Eiichi
Kiyono, Ken
Kelty-Stephen, Damian G.
author_facet Mangalam, Madhur
Sadri, Arash
Hayano, Junichiro
Watanabe, Eiichi
Kiyono, Ken
Kelty-Stephen, Damian G.
author_sort Mangalam, Madhur
collection PubMed
description Any reliable biomarker has to be specific, generalizable, and reproducible across individuals and contexts. The exact values of such a biomarker must represent similar health states in different individuals and at different times within the same individual to result in the minimum possible false-positive and false-negative rates. The application of standard cut-off points and risk scores across populations hinges upon the assumption of such generalizability. Such generalizability, in turn, hinges upon this condition that the phenomenon investigated by current statistical methods is ergodic, i.e., its statistical measures converge over individuals and time within the finite limit of observations. However, emerging evidence indicates that biological processes abound with non-ergodicity, threatening this generalizability. Here, we present a solution for how to make generalizable inferences by deriving ergodic descriptions of non-ergodic phenomena. For this aim, we proposed capturing the origin of ergodicity-breaking in many biological processes: cascade dynamics. To assess our hypotheses, we embraced the challenge of identifying reliable biomarkers for heart disease and stroke, which, despite being the leading cause of death worldwide and decades of research, lacks reliable biomarkers and risk stratification tools. We showed that raw R-R interval data and its common descriptors based on mean and variance are non-ergodic and non-specific. On the other hand, the cascade-dynamical descriptors, the Hurst exponent encoding linear temporal correlations, and multifractal nonlinearity encoding nonlinear interactions across scales described the non-ergodic heart rate variability ergodically and were specific. This study inaugurates applying the critical concept of ergodicity in discovering and applying digital biomarkers of health and disease.
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spelling pubmed-101977362023-05-20 Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity Mangalam, Madhur Sadri, Arash Hayano, Junichiro Watanabe, Eiichi Kiyono, Ken Kelty-Stephen, Damian G. ArXiv Article Any reliable biomarker has to be specific, generalizable, and reproducible across individuals and contexts. The exact values of such a biomarker must represent similar health states in different individuals and at different times within the same individual to result in the minimum possible false-positive and false-negative rates. The application of standard cut-off points and risk scores across populations hinges upon the assumption of such generalizability. Such generalizability, in turn, hinges upon this condition that the phenomenon investigated by current statistical methods is ergodic, i.e., its statistical measures converge over individuals and time within the finite limit of observations. However, emerging evidence indicates that biological processes abound with non-ergodicity, threatening this generalizability. Here, we present a solution for how to make generalizable inferences by deriving ergodic descriptions of non-ergodic phenomena. For this aim, we proposed capturing the origin of ergodicity-breaking in many biological processes: cascade dynamics. To assess our hypotheses, we embraced the challenge of identifying reliable biomarkers for heart disease and stroke, which, despite being the leading cause of death worldwide and decades of research, lacks reliable biomarkers and risk stratification tools. We showed that raw R-R interval data and its common descriptors based on mean and variance are non-ergodic and non-specific. On the other hand, the cascade-dynamical descriptors, the Hurst exponent encoding linear temporal correlations, and multifractal nonlinearity encoding nonlinear interactions across scales described the non-ergodic heart rate variability ergodically and were specific. This study inaugurates applying the critical concept of ergodicity in discovering and applying digital biomarkers of health and disease. Cornell University 2023-05-11 /pmc/articles/PMC10197736/ /pubmed/37214137 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Mangalam, Madhur
Sadri, Arash
Hayano, Junichiro
Watanabe, Eiichi
Kiyono, Ken
Kelty-Stephen, Damian G.
Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity
title Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity
title_full Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity
title_fullStr Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity
title_full_unstemmed Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity
title_short Reproducible biomarkers: Leveraging nonlinear descriptors in the face of non-ergodicity
title_sort reproducible biomarkers: leveraging nonlinear descriptors in the face of non-ergodicity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10197736/
https://www.ncbi.nlm.nih.gov/pubmed/37214137
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