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A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus

Arthropod-borne virus (arbovirus) and arthropod-specific virus (ASV) are viruses circulating amongst hematophagous arthropods that are broadly transmitted in ecological systems. Arbovirus may replicate in both vertebrates and invertebrates and some are known to be pathogenic to animals or humans. AS...

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Autores principales: Huang, Ying, Wang, Shunlong, Liu, Hong, Atoni, Evans, Wang, Fei, Chen, Wei, Li, Zhaolin, Rodriguez, Sergio, Yuan, Zhiming, Ming, Zhaoyan, Xia, Han
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10199016/
https://www.ncbi.nlm.nih.gov/pubmed/37208388
http://dx.doi.org/10.1038/s41597-023-02226-8
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author Huang, Ying
Wang, Shunlong
Liu, Hong
Atoni, Evans
Wang, Fei
Chen, Wei
Li, Zhaolin
Rodriguez, Sergio
Yuan, Zhiming
Ming, Zhaoyan
Xia, Han
author_facet Huang, Ying
Wang, Shunlong
Liu, Hong
Atoni, Evans
Wang, Fei
Chen, Wei
Li, Zhaolin
Rodriguez, Sergio
Yuan, Zhiming
Ming, Zhaoyan
Xia, Han
author_sort Huang, Ying
collection PubMed
description Arthropod-borne virus (arbovirus) and arthropod-specific virus (ASV) are viruses circulating amongst hematophagous arthropods that are broadly transmitted in ecological systems. Arbovirus may replicate in both vertebrates and invertebrates and some are known to be pathogenic to animals or humans. ASV only replicate in invertebrate arthropods yet they are basal to many types of arboviruses. We built a comprehensive dataset of arbovirus and ASV by curating globally available data from the Arbovirus Catalog, the arbovirus list in Section VIII-F of the Biosafety in Microbiological and Biomedical Laboratories 6th edition, Virus Metadata Resource of International Committee on Taxonomy of Viruses, and GenBank. Revealing the diversity, distribution and biosafety recommendation of arbovirus and ASV at a global scale is essential to the understanding of potential interactions, evolution, and risks associated with these viruses. Moreover, the genomic sequences associated with the dataset will enable the investigation of genetic patterns distinguishing the two groups, as well as aid in predicting the vector/host relationships of the newly discovered viruses.
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spelling pubmed-101990162023-05-21 A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus Huang, Ying Wang, Shunlong Liu, Hong Atoni, Evans Wang, Fei Chen, Wei Li, Zhaolin Rodriguez, Sergio Yuan, Zhiming Ming, Zhaoyan Xia, Han Sci Data Data Descriptor Arthropod-borne virus (arbovirus) and arthropod-specific virus (ASV) are viruses circulating amongst hematophagous arthropods that are broadly transmitted in ecological systems. Arbovirus may replicate in both vertebrates and invertebrates and some are known to be pathogenic to animals or humans. ASV only replicate in invertebrate arthropods yet they are basal to many types of arboviruses. We built a comprehensive dataset of arbovirus and ASV by curating globally available data from the Arbovirus Catalog, the arbovirus list in Section VIII-F of the Biosafety in Microbiological and Biomedical Laboratories 6th edition, Virus Metadata Resource of International Committee on Taxonomy of Viruses, and GenBank. Revealing the diversity, distribution and biosafety recommendation of arbovirus and ASV at a global scale is essential to the understanding of potential interactions, evolution, and risks associated with these viruses. Moreover, the genomic sequences associated with the dataset will enable the investigation of genetic patterns distinguishing the two groups, as well as aid in predicting the vector/host relationships of the newly discovered viruses. Nature Publishing Group UK 2023-05-19 /pmc/articles/PMC10199016/ /pubmed/37208388 http://dx.doi.org/10.1038/s41597-023-02226-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Huang, Ying
Wang, Shunlong
Liu, Hong
Atoni, Evans
Wang, Fei
Chen, Wei
Li, Zhaolin
Rodriguez, Sergio
Yuan, Zhiming
Ming, Zhaoyan
Xia, Han
A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus
title A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus
title_full A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus
title_fullStr A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus
title_full_unstemmed A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus
title_short A global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus
title_sort global dataset of sequence, diversity and biosafety recommendation of arbovirus and arthropod-specific virus
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10199016/
https://www.ncbi.nlm.nih.gov/pubmed/37208388
http://dx.doi.org/10.1038/s41597-023-02226-8
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