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Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units
Crystallization of alkaline earth metal carbonates from water is important for biomineralization and environmental geochemistry. Here, large-scale computer simulations are a useful approach to complement experimental studies by providing atomistic insights and even by quantitatively determining the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10200348/ https://www.ncbi.nlm.nih.gov/pubmed/37211028 http://dx.doi.org/10.1098/rsta.2022.0250 |
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author | Armstrong, Blake Silvestri, Alessandro Demichelis, Raffaella Raiteri, Paolo Gale, Julian D. |
author_facet | Armstrong, Blake Silvestri, Alessandro Demichelis, Raffaella Raiteri, Paolo Gale, Julian D. |
author_sort | Armstrong, Blake |
collection | PubMed |
description | Crystallization of alkaline earth metal carbonates from water is important for biomineralization and environmental geochemistry. Here, large-scale computer simulations are a useful approach to complement experimental studies by providing atomistic insights and even by quantitatively determining the thermodynamics of individual steps. However, this is dependent on the existence of force field models that are sufficiently accurate while being computationally efficient enough to sample complex systems. Here, we introduce a revised force field for aqueous alkaline earth metal carbonates that reproduces both the solubilities of the crystalline anhydrous minerals, as well as the hydration free energies of the ions. The model is also designed to run efficiently on graphical processing units thereby reducing the cost of such simulations. The performance of the revised force field is compared against previous results for important properties relevant to crystallization, including ion-pairing and mineral–water interfacial structure and dynamics. This article is part of a discussion meeting issue ‘Supercomputing simulations of advanced materials’. |
format | Online Article Text |
id | pubmed-10200348 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-102003482023-05-22 Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units Armstrong, Blake Silvestri, Alessandro Demichelis, Raffaella Raiteri, Paolo Gale, Julian D. Philos Trans A Math Phys Eng Sci Articles Crystallization of alkaline earth metal carbonates from water is important for biomineralization and environmental geochemistry. Here, large-scale computer simulations are a useful approach to complement experimental studies by providing atomistic insights and even by quantitatively determining the thermodynamics of individual steps. However, this is dependent on the existence of force field models that are sufficiently accurate while being computationally efficient enough to sample complex systems. Here, we introduce a revised force field for aqueous alkaline earth metal carbonates that reproduces both the solubilities of the crystalline anhydrous minerals, as well as the hydration free energies of the ions. The model is also designed to run efficiently on graphical processing units thereby reducing the cost of such simulations. The performance of the revised force field is compared against previous results for important properties relevant to crystallization, including ion-pairing and mineral–water interfacial structure and dynamics. This article is part of a discussion meeting issue ‘Supercomputing simulations of advanced materials’. The Royal Society 2023-07-10 2023-05-22 /pmc/articles/PMC10200348/ /pubmed/37211028 http://dx.doi.org/10.1098/rsta.2022.0250 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Articles Armstrong, Blake Silvestri, Alessandro Demichelis, Raffaella Raiteri, Paolo Gale, Julian D. Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units |
title | Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units |
title_full | Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units |
title_fullStr | Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units |
title_full_unstemmed | Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units |
title_short | Solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units |
title_sort | solubility-consistent force field simulations for aqueous metal carbonate systems using graphical processing units |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10200348/ https://www.ncbi.nlm.nih.gov/pubmed/37211028 http://dx.doi.org/10.1098/rsta.2022.0250 |
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