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Common Cations Are Not Polarizable: Effects of Dispersion Correction on Hydration Structures from Ab Initio Molecular Dynamics
[Image: see text] We employed density functional theory-based ab initio molecular dynamics simulations to examine the hydration structure of several common alkali and alkali earth metal cations. We found that the commonly used atom pairwise dispersion correction scheme D3, which assigns dispersion c...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10201575/ https://www.ncbi.nlm.nih.gov/pubmed/37140439 http://dx.doi.org/10.1021/acs.jpclett.3c00856 |
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author | Kostal, Vojtech Mason, Philip E. Martinez-Seara, Hector Jungwirth, Pavel |
author_facet | Kostal, Vojtech Mason, Philip E. Martinez-Seara, Hector Jungwirth, Pavel |
author_sort | Kostal, Vojtech |
collection | PubMed |
description | [Image: see text] We employed density functional theory-based ab initio molecular dynamics simulations to examine the hydration structure of several common alkali and alkali earth metal cations. We found that the commonly used atom pairwise dispersion correction scheme D3, which assigns dispersion coefficients based on the neutral form of the atom rather than its actual oxidation state, leads to inaccuracies in the hydration structures of these cations. We evaluated this effect for lithium, sodium, potassium, and calcium and found that the inaccuracies are particularly pronounced for sodium and potassium compared to the experiment. To remedy this issue, we propose disabling the D3 correction specifically for all cation-including pairs, which leads to a much better agreement with experimental data. |
format | Online Article Text |
id | pubmed-10201575 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-102015752023-05-23 Common Cations Are Not Polarizable: Effects of Dispersion Correction on Hydration Structures from Ab Initio Molecular Dynamics Kostal, Vojtech Mason, Philip E. Martinez-Seara, Hector Jungwirth, Pavel J Phys Chem Lett [Image: see text] We employed density functional theory-based ab initio molecular dynamics simulations to examine the hydration structure of several common alkali and alkali earth metal cations. We found that the commonly used atom pairwise dispersion correction scheme D3, which assigns dispersion coefficients based on the neutral form of the atom rather than its actual oxidation state, leads to inaccuracies in the hydration structures of these cations. We evaluated this effect for lithium, sodium, potassium, and calcium and found that the inaccuracies are particularly pronounced for sodium and potassium compared to the experiment. To remedy this issue, we propose disabling the D3 correction specifically for all cation-including pairs, which leads to a much better agreement with experimental data. American Chemical Society 2023-05-04 /pmc/articles/PMC10201575/ /pubmed/37140439 http://dx.doi.org/10.1021/acs.jpclett.3c00856 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Kostal, Vojtech Mason, Philip E. Martinez-Seara, Hector Jungwirth, Pavel Common Cations Are Not Polarizable: Effects of Dispersion Correction on Hydration Structures from Ab Initio Molecular Dynamics |
title | Common Cations Are Not Polarizable: Effects of Dispersion
Correction on Hydration Structures from Ab Initio Molecular Dynamics |
title_full | Common Cations Are Not Polarizable: Effects of Dispersion
Correction on Hydration Structures from Ab Initio Molecular Dynamics |
title_fullStr | Common Cations Are Not Polarizable: Effects of Dispersion
Correction on Hydration Structures from Ab Initio Molecular Dynamics |
title_full_unstemmed | Common Cations Are Not Polarizable: Effects of Dispersion
Correction on Hydration Structures from Ab Initio Molecular Dynamics |
title_short | Common Cations Are Not Polarizable: Effects of Dispersion
Correction on Hydration Structures from Ab Initio Molecular Dynamics |
title_sort | common cations are not polarizable: effects of dispersion
correction on hydration structures from ab initio molecular dynamics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10201575/ https://www.ncbi.nlm.nih.gov/pubmed/37140439 http://dx.doi.org/10.1021/acs.jpclett.3c00856 |
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