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A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background
It is valuable to develop a generic model that can accurately estimate the leaf area index (LAI) of wheat from unmanned aerial vehicle-based multispectral data for diverse soil backgrounds without any ground calibration. To achieve this objective, 2 strategies were investigated to improve our existi...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AAAS
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10205590/ https://www.ncbi.nlm.nih.gov/pubmed/37234427 http://dx.doi.org/10.34133/plantphenomics.0055 |
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author | Chen, Qiaomin Zheng, Bangyou Chenu, Karine Chapman, Scott C. |
author_facet | Chen, Qiaomin Zheng, Bangyou Chenu, Karine Chapman, Scott C. |
author_sort | Chen, Qiaomin |
collection | PubMed |
description | It is valuable to develop a generic model that can accurately estimate the leaf area index (LAI) of wheat from unmanned aerial vehicle-based multispectral data for diverse soil backgrounds without any ground calibration. To achieve this objective, 2 strategies were investigated to improve our existing random forest regression (RFR) model, which was trained with simulations from a radiative transfer model (PROSAIL). The 2 strategies consisted of (a) broadening the reflectance domain of soil background to generate training data and (b) finding an appropriate set of indicators (band reflectance and/or vegetation indices) as inputs of the RFR model. The RFR models were tested in diverse soils representing varying soil types in Australia. Simulation analysis indicated that adopting both strategies resulted in a generic model that can provide accurate estimation for wheat LAI and is resistant to changes in soil background. From validation on 2 years of field trials, this model achieved high prediction accuracy for LAI over the entire crop cycle (LAI up to 7 m(2) m(−2)) (root mean square error (RMSE): 0.23 to 0.89 m(2) m(−2)), including for sparse canopy (LAI less than 0.3 m(2) m(−2)) grown on different soil types (RMSE: 0.02 to 0.25 m(2) m(−2)). The model reliably captured the seasonal pattern of LAI dynamics for different treatments in terms of genotypes, plant densities, and water–nitrogen managements (correlation coefficient: 0.82 to 0.98). With appropriate adaptations, this framework can be adjusted to any type of sensors to estimate various traits for various species (including but not limited to LAI of wheat) in associated disciplines, e.g., crop breeding, precision agriculture, etc. |
format | Online Article Text |
id | pubmed-10205590 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | AAAS |
record_format | MEDLINE/PubMed |
spelling | pubmed-102055902023-05-25 A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background Chen, Qiaomin Zheng, Bangyou Chenu, Karine Chapman, Scott C. Plant Phenomics Research Article It is valuable to develop a generic model that can accurately estimate the leaf area index (LAI) of wheat from unmanned aerial vehicle-based multispectral data for diverse soil backgrounds without any ground calibration. To achieve this objective, 2 strategies were investigated to improve our existing random forest regression (RFR) model, which was trained with simulations from a radiative transfer model (PROSAIL). The 2 strategies consisted of (a) broadening the reflectance domain of soil background to generate training data and (b) finding an appropriate set of indicators (band reflectance and/or vegetation indices) as inputs of the RFR model. The RFR models were tested in diverse soils representing varying soil types in Australia. Simulation analysis indicated that adopting both strategies resulted in a generic model that can provide accurate estimation for wheat LAI and is resistant to changes in soil background. From validation on 2 years of field trials, this model achieved high prediction accuracy for LAI over the entire crop cycle (LAI up to 7 m(2) m(−2)) (root mean square error (RMSE): 0.23 to 0.89 m(2) m(−2)), including for sparse canopy (LAI less than 0.3 m(2) m(−2)) grown on different soil types (RMSE: 0.02 to 0.25 m(2) m(−2)). The model reliably captured the seasonal pattern of LAI dynamics for different treatments in terms of genotypes, plant densities, and water–nitrogen managements (correlation coefficient: 0.82 to 0.98). With appropriate adaptations, this framework can be adjusted to any type of sensors to estimate various traits for various species (including but not limited to LAI of wheat) in associated disciplines, e.g., crop breeding, precision agriculture, etc. AAAS 2023-05-23 /pmc/articles/PMC10205590/ /pubmed/37234427 http://dx.doi.org/10.34133/plantphenomics.0055 Text en Copyright © 2023 Qiaomin Chen et al. https://creativecommons.org/licenses/by/4.0/Exclusive licensee Nanjing Agricultural University. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License (CC BY 4.0) (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Article Chen, Qiaomin Zheng, Bangyou Chenu, Karine Chapman, Scott C. A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background |
title | A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background |
title_full | A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background |
title_fullStr | A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background |
title_full_unstemmed | A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background |
title_short | A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background |
title_sort | generic model to estimate wheat lai over growing season regardless of the soil-type background |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10205590/ https://www.ncbi.nlm.nih.gov/pubmed/37234427 http://dx.doi.org/10.34133/plantphenomics.0055 |
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