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Vision Transformers for Lung Segmentation on CXR Images

Accurate segmentation of the lungs in CXR images is the basis for an automated CXR image analysis system. It helps radiologists in detecting lung areas, subtle signs of disease and improving the diagnosis process for patients. However, precise semantic segmentation of lungs is considered a challengi...

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Detalles Bibliográficos
Autores principales: Ghali, Rafik, Akhloufi, Moulay A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Nature Singapore 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10206550/
https://www.ncbi.nlm.nih.gov/pubmed/37252339
http://dx.doi.org/10.1007/s42979-023-01848-4
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author Ghali, Rafik
Akhloufi, Moulay A.
author_facet Ghali, Rafik
Akhloufi, Moulay A.
author_sort Ghali, Rafik
collection PubMed
description Accurate segmentation of the lungs in CXR images is the basis for an automated CXR image analysis system. It helps radiologists in detecting lung areas, subtle signs of disease and improving the diagnosis process for patients. However, precise semantic segmentation of lungs is considered a challenging case due to the presence of the edge rib cage, wide variation of lung shape, and lungs affected by diseases. In this paper, we address the problem of lung segmentation in healthy and unhealthy CXR images. Five models were developed and used in detecting and segmenting lung regions. Two loss functions and three benchmark datasets were employed to evaluate these models. Experimental results showed that the proposed models were able to extract salient global and local features from the input CXR images. The best performing model achieved an F1 score of 97.47%, outperforming recent published models. They proved their ability to separate lung regions from the rib cage and clavicle edges and segment varying lung shape depending on age and gender, as well as challenging cases of lungs affected by anomalies such as tuberculosis and the presence of nodules.
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spelling pubmed-102065502023-05-25 Vision Transformers for Lung Segmentation on CXR Images Ghali, Rafik Akhloufi, Moulay A. SN Comput Sci Original Research Accurate segmentation of the lungs in CXR images is the basis for an automated CXR image analysis system. It helps radiologists in detecting lung areas, subtle signs of disease and improving the diagnosis process for patients. However, precise semantic segmentation of lungs is considered a challenging case due to the presence of the edge rib cage, wide variation of lung shape, and lungs affected by diseases. In this paper, we address the problem of lung segmentation in healthy and unhealthy CXR images. Five models were developed and used in detecting and segmenting lung regions. Two loss functions and three benchmark datasets were employed to evaluate these models. Experimental results showed that the proposed models were able to extract salient global and local features from the input CXR images. The best performing model achieved an F1 score of 97.47%, outperforming recent published models. They proved their ability to separate lung regions from the rib cage and clavicle edges and segment varying lung shape depending on age and gender, as well as challenging cases of lungs affected by anomalies such as tuberculosis and the presence of nodules. Springer Nature Singapore 2023-05-24 2023 /pmc/articles/PMC10206550/ /pubmed/37252339 http://dx.doi.org/10.1007/s42979-023-01848-4 Text en © The Author(s), under exclusive licence to Springer Nature Singapore Pte Ltd 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Research
Ghali, Rafik
Akhloufi, Moulay A.
Vision Transformers for Lung Segmentation on CXR Images
title Vision Transformers for Lung Segmentation on CXR Images
title_full Vision Transformers for Lung Segmentation on CXR Images
title_fullStr Vision Transformers for Lung Segmentation on CXR Images
title_full_unstemmed Vision Transformers for Lung Segmentation on CXR Images
title_short Vision Transformers for Lung Segmentation on CXR Images
title_sort vision transformers for lung segmentation on cxr images
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10206550/
https://www.ncbi.nlm.nih.gov/pubmed/37252339
http://dx.doi.org/10.1007/s42979-023-01848-4
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