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Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives

[Image: see text] As weak acids or bases, in solution, drug molecules are in either their ionized or nonionized states. A high degree of ionization is essential for good water solubility of a drug molecule and is required for drug–receptor interactions, whereas the nonionized form improves a drug’s...

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Autores principales: Arslan, Evrim, Haslak, Zeynep Pinar, Monard, Gérald, Dogan, Ilknur, Aviyente, Viktorya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10207282/
https://www.ncbi.nlm.nih.gov/pubmed/37126823
http://dx.doi.org/10.1021/acs.jcim.2c01468
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author Arslan, Evrim
Haslak, Zeynep Pinar
Monard, Gérald
Dogan, Ilknur
Aviyente, Viktorya
author_facet Arslan, Evrim
Haslak, Zeynep Pinar
Monard, Gérald
Dogan, Ilknur
Aviyente, Viktorya
author_sort Arslan, Evrim
collection PubMed
description [Image: see text] As weak acids or bases, in solution, drug molecules are in either their ionized or nonionized states. A high degree of ionization is essential for good water solubility of a drug molecule and is required for drug–receptor interactions, whereas the nonionized form improves a drug’s lipophilicity, allowing the ligand to cross the cell membrane. The penetration of a drug ligand through cell membranes is mainly governed by the pK(a) of the drug molecule and the membrane environment. In this study, with the aim of predicting the acetonitrile pK(a)’s (pK(a(MeCN))) of eight drug-like thiazol-2-imine derivatives, we propose a very accurate and computationally affordable protocol by using several quantum mechanical approaches. Benchmark studies were conducted on a set of training molecules, which were selected from the literature with known pK(a(water)) and pK(a(MeCN)). Highly well-correlated pK(a) values were obtained when the calculations were performed with the isodesmic method at the M062X/6-31G** level of theory in conjunction with SMD solvation model for nitrogen-containing heterocycles. Finally, experimentally unknown pK(a(MeCN)) values of eight thiazol-2-imine structures, which were previously synthesized by some of us, are proposed.
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spelling pubmed-102072822023-05-25 Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives Arslan, Evrim Haslak, Zeynep Pinar Monard, Gérald Dogan, Ilknur Aviyente, Viktorya J Chem Inf Model [Image: see text] As weak acids or bases, in solution, drug molecules are in either their ionized or nonionized states. A high degree of ionization is essential for good water solubility of a drug molecule and is required for drug–receptor interactions, whereas the nonionized form improves a drug’s lipophilicity, allowing the ligand to cross the cell membrane. The penetration of a drug ligand through cell membranes is mainly governed by the pK(a) of the drug molecule and the membrane environment. In this study, with the aim of predicting the acetonitrile pK(a)’s (pK(a(MeCN))) of eight drug-like thiazol-2-imine derivatives, we propose a very accurate and computationally affordable protocol by using several quantum mechanical approaches. Benchmark studies were conducted on a set of training molecules, which were selected from the literature with known pK(a(water)) and pK(a(MeCN)). Highly well-correlated pK(a) values were obtained when the calculations were performed with the isodesmic method at the M062X/6-31G** level of theory in conjunction with SMD solvation model for nitrogen-containing heterocycles. Finally, experimentally unknown pK(a(MeCN)) values of eight thiazol-2-imine structures, which were previously synthesized by some of us, are proposed. American Chemical Society 2023-05-01 /pmc/articles/PMC10207282/ /pubmed/37126823 http://dx.doi.org/10.1021/acs.jcim.2c01468 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Arslan, Evrim
Haslak, Zeynep Pinar
Monard, Gérald
Dogan, Ilknur
Aviyente, Viktorya
Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives
title Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives
title_full Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives
title_fullStr Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives
title_full_unstemmed Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives
title_short Quantum Mechanical Prediction of Dissociation Constants for Thiazol-2-imine Derivatives
title_sort quantum mechanical prediction of dissociation constants for thiazol-2-imine derivatives
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10207282/
https://www.ncbi.nlm.nih.gov/pubmed/37126823
http://dx.doi.org/10.1021/acs.jcim.2c01468
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