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Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries

Preterm birth (PTB) is the leading cause of death in children under five, yet comprehensive studies are hindered by its multiple complex etiologies. Epidemiological associations between PTB and maternal characteristics have been previously described. This work used multiomic profiling and multivaria...

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Autores principales: Espinosa, Camilo A., Khan, Waqasuddin, Khanam, Rasheda, Das, Sayan, Khalid, Javairia, Pervin, Jesmin, Kasaro, Margaret P., Contrepois, Kévin, Chang, Alan L., Phongpreecha, Thanaphong, Michael, Basil, Ellenberger, Mathew, Mehmood, Usma, Hotwani, Aneeta, Nizar, Ambreen, Kabir, Furqan, Wong, Ronald J., Becker, Martin, Berson, Eloise, Culos, Anthony, De Francesco, Davide, Mataraso, Samson, Ravindra, Neal, Thuraiappah, Melan, Xenochristou, Maria, Stelzer, Ina A., Marić, Ivana, Dutta, Arup, Raqib, Rubhana, Ahmed, Salahuddin, Rahman, Sayedur, Hasan, A. S. M. Tarik, Ali, Said M., Juma, Mohamed H., Rahman, Monjur, Aktar, Shaki, Deb, Saikat, Price, Joan T., Wise, Paul H., Winn, Virginia D., Druzin, Maurice L., Gibbs, Ronald S., Darmstadt, Gary L., Murray, Jeffrey C., Stringer, Jeffrey S. A., Gaudilliere, Brice, Snyder, Michael P., Angst, Martin S., Rahman, Anisur, Baqui, Abdullah H., Jehan, Fyezah, Nisar, Muhammad Imran, Vwalika, Bellington, Sazawal, Sunil, Shaw, Gary M., Stevenson, David K., Aghaeepour, Nima
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10208584/
https://www.ncbi.nlm.nih.gov/pubmed/37224249
http://dx.doi.org/10.1126/sciadv.ade7692
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author Espinosa, Camilo A.
Khan, Waqasuddin
Khanam, Rasheda
Das, Sayan
Khalid, Javairia
Pervin, Jesmin
Kasaro, Margaret P.
Contrepois, Kévin
Chang, Alan L.
Phongpreecha, Thanaphong
Michael, Basil
Ellenberger, Mathew
Mehmood, Usma
Hotwani, Aneeta
Nizar, Ambreen
Kabir, Furqan
Wong, Ronald J.
Becker, Martin
Berson, Eloise
Culos, Anthony
De Francesco, Davide
Mataraso, Samson
Ravindra, Neal
Thuraiappah, Melan
Xenochristou, Maria
Stelzer, Ina A.
Marić, Ivana
Dutta, Arup
Raqib, Rubhana
Ahmed, Salahuddin
Rahman, Sayedur
Hasan, A. S. M. Tarik
Ali, Said M.
Juma, Mohamed H.
Rahman, Monjur
Aktar, Shaki
Deb, Saikat
Price, Joan T.
Wise, Paul H.
Winn, Virginia D.
Druzin, Maurice L.
Gibbs, Ronald S.
Darmstadt, Gary L.
Murray, Jeffrey C.
Stringer, Jeffrey S. A.
Gaudilliere, Brice
Snyder, Michael P.
Angst, Martin S.
Rahman, Anisur
Baqui, Abdullah H.
Jehan, Fyezah
Nisar, Muhammad Imran
Vwalika, Bellington
Sazawal, Sunil
Shaw, Gary M.
Stevenson, David K.
Aghaeepour, Nima
author_facet Espinosa, Camilo A.
Khan, Waqasuddin
Khanam, Rasheda
Das, Sayan
Khalid, Javairia
Pervin, Jesmin
Kasaro, Margaret P.
Contrepois, Kévin
Chang, Alan L.
Phongpreecha, Thanaphong
Michael, Basil
Ellenberger, Mathew
Mehmood, Usma
Hotwani, Aneeta
Nizar, Ambreen
Kabir, Furqan
Wong, Ronald J.
Becker, Martin
Berson, Eloise
Culos, Anthony
De Francesco, Davide
Mataraso, Samson
Ravindra, Neal
Thuraiappah, Melan
Xenochristou, Maria
Stelzer, Ina A.
Marić, Ivana
Dutta, Arup
Raqib, Rubhana
Ahmed, Salahuddin
Rahman, Sayedur
Hasan, A. S. M. Tarik
Ali, Said M.
Juma, Mohamed H.
Rahman, Monjur
Aktar, Shaki
Deb, Saikat
Price, Joan T.
Wise, Paul H.
Winn, Virginia D.
Druzin, Maurice L.
Gibbs, Ronald S.
Darmstadt, Gary L.
Murray, Jeffrey C.
Stringer, Jeffrey S. A.
Gaudilliere, Brice
Snyder, Michael P.
Angst, Martin S.
Rahman, Anisur
Baqui, Abdullah H.
Jehan, Fyezah
Nisar, Muhammad Imran
Vwalika, Bellington
Sazawal, Sunil
Shaw, Gary M.
Stevenson, David K.
Aghaeepour, Nima
author_sort Espinosa, Camilo A.
collection PubMed
description Preterm birth (PTB) is the leading cause of death in children under five, yet comprehensive studies are hindered by its multiple complex etiologies. Epidemiological associations between PTB and maternal characteristics have been previously described. This work used multiomic profiling and multivariate modeling to investigate the biological signatures of these characteristics. Maternal covariates were collected during pregnancy from 13,841 pregnant women across five sites. Plasma samples from 231 participants were analyzed to generate proteomic, metabolomic, and lipidomic datasets. Machine learning models showed robust performance for the prediction of PTB (AUROC = 0.70), time-to-delivery (r = 0.65), maternal age (r = 0.59), gravidity (r = 0.56), and BMI (r = 0.81). Time-to-delivery biological correlates included fetal-associated proteins (e.g., ALPP, AFP, and PGF) and immune proteins (e.g., PD-L1, CCL28, and LIFR). Maternal age negatively correlated with collagen COL9A1, gravidity with endothelial NOS and inflammatory chemokine CXCL13, and BMI with leptin and structural protein FABP4. These results provide an integrated view of epidemiological factors associated with PTB and identify biological signatures of clinical covariates affecting this disease.
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spelling pubmed-102085842023-05-26 Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries Espinosa, Camilo A. Khan, Waqasuddin Khanam, Rasheda Das, Sayan Khalid, Javairia Pervin, Jesmin Kasaro, Margaret P. Contrepois, Kévin Chang, Alan L. Phongpreecha, Thanaphong Michael, Basil Ellenberger, Mathew Mehmood, Usma Hotwani, Aneeta Nizar, Ambreen Kabir, Furqan Wong, Ronald J. Becker, Martin Berson, Eloise Culos, Anthony De Francesco, Davide Mataraso, Samson Ravindra, Neal Thuraiappah, Melan Xenochristou, Maria Stelzer, Ina A. Marić, Ivana Dutta, Arup Raqib, Rubhana Ahmed, Salahuddin Rahman, Sayedur Hasan, A. S. M. Tarik Ali, Said M. Juma, Mohamed H. Rahman, Monjur Aktar, Shaki Deb, Saikat Price, Joan T. Wise, Paul H. Winn, Virginia D. Druzin, Maurice L. Gibbs, Ronald S. Darmstadt, Gary L. Murray, Jeffrey C. Stringer, Jeffrey S. A. Gaudilliere, Brice Snyder, Michael P. Angst, Martin S. Rahman, Anisur Baqui, Abdullah H. Jehan, Fyezah Nisar, Muhammad Imran Vwalika, Bellington Sazawal, Sunil Shaw, Gary M. Stevenson, David K. Aghaeepour, Nima Sci Adv Social and Interdisciplinary Sciences Preterm birth (PTB) is the leading cause of death in children under five, yet comprehensive studies are hindered by its multiple complex etiologies. Epidemiological associations between PTB and maternal characteristics have been previously described. This work used multiomic profiling and multivariate modeling to investigate the biological signatures of these characteristics. Maternal covariates were collected during pregnancy from 13,841 pregnant women across five sites. Plasma samples from 231 participants were analyzed to generate proteomic, metabolomic, and lipidomic datasets. Machine learning models showed robust performance for the prediction of PTB (AUROC = 0.70), time-to-delivery (r = 0.65), maternal age (r = 0.59), gravidity (r = 0.56), and BMI (r = 0.81). Time-to-delivery biological correlates included fetal-associated proteins (e.g., ALPP, AFP, and PGF) and immune proteins (e.g., PD-L1, CCL28, and LIFR). Maternal age negatively correlated with collagen COL9A1, gravidity with endothelial NOS and inflammatory chemokine CXCL13, and BMI with leptin and structural protein FABP4. These results provide an integrated view of epidemiological factors associated with PTB and identify biological signatures of clinical covariates affecting this disease. American Association for the Advancement of Science 2023-05-26 /pmc/articles/PMC10208584/ /pubmed/37224249 http://dx.doi.org/10.1126/sciadv.ade7692 Text en Copyright © 2023 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Social and Interdisciplinary Sciences
Espinosa, Camilo A.
Khan, Waqasuddin
Khanam, Rasheda
Das, Sayan
Khalid, Javairia
Pervin, Jesmin
Kasaro, Margaret P.
Contrepois, Kévin
Chang, Alan L.
Phongpreecha, Thanaphong
Michael, Basil
Ellenberger, Mathew
Mehmood, Usma
Hotwani, Aneeta
Nizar, Ambreen
Kabir, Furqan
Wong, Ronald J.
Becker, Martin
Berson, Eloise
Culos, Anthony
De Francesco, Davide
Mataraso, Samson
Ravindra, Neal
Thuraiappah, Melan
Xenochristou, Maria
Stelzer, Ina A.
Marić, Ivana
Dutta, Arup
Raqib, Rubhana
Ahmed, Salahuddin
Rahman, Sayedur
Hasan, A. S. M. Tarik
Ali, Said M.
Juma, Mohamed H.
Rahman, Monjur
Aktar, Shaki
Deb, Saikat
Price, Joan T.
Wise, Paul H.
Winn, Virginia D.
Druzin, Maurice L.
Gibbs, Ronald S.
Darmstadt, Gary L.
Murray, Jeffrey C.
Stringer, Jeffrey S. A.
Gaudilliere, Brice
Snyder, Michael P.
Angst, Martin S.
Rahman, Anisur
Baqui, Abdullah H.
Jehan, Fyezah
Nisar, Muhammad Imran
Vwalika, Bellington
Sazawal, Sunil
Shaw, Gary M.
Stevenson, David K.
Aghaeepour, Nima
Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries
title Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries
title_full Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries
title_fullStr Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries
title_full_unstemmed Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries
title_short Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries
title_sort multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries
topic Social and Interdisciplinary Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10208584/
https://www.ncbi.nlm.nih.gov/pubmed/37224249
http://dx.doi.org/10.1126/sciadv.ade7692
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