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Bayesian network analysis of antidepressant treatment trajectories
It is currently difficult to successfully choose the correct type of antidepressant for individual patients. To discover patterns in patient characteristics, treatment choices and outcomes, we performed retrospective Bayesian network analysis combined with natural language processing (NLP). This stu...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209137/ https://www.ncbi.nlm.nih.gov/pubmed/37225783 http://dx.doi.org/10.1038/s41598-023-35508-7 |
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author | Turner, Rosanne J. Hagoort, Karin Meijer, Rosa J. Coenen, Femke Scheepers, Floortje E. |
author_facet | Turner, Rosanne J. Hagoort, Karin Meijer, Rosa J. Coenen, Femke Scheepers, Floortje E. |
author_sort | Turner, Rosanne J. |
collection | PubMed |
description | It is currently difficult to successfully choose the correct type of antidepressant for individual patients. To discover patterns in patient characteristics, treatment choices and outcomes, we performed retrospective Bayesian network analysis combined with natural language processing (NLP). This study was conducted at two mental healthcare facilities in the Netherlands. Adult patients admitted and treated with antidepressants between 2014 and 2020 were included. Outcome measures were antidepressant continuation, prescription duration and four treatment outcome topics: core complaints, social functioning, general well-being and patient experience, extracted through NLP of clinical notes. Combined with patient and treatment characteristics, Bayesian networks were constructed at both facilities and compared. Antidepressant choices were continued in 66% and 89% of antidepressant trajectories. Score-based network analysis revealed 28 dependencies between treatment choices, patient characteristics and outcomes. Treatment outcomes and prescription duration were tightly intertwined and interacted with antipsychotics and benzodiazepine co-medication. Tricyclic antidepressant prescription and depressive disorder were important predictors for antidepressant continuation. We show a feasible way of pattern discovery in psychiatry data, through combining network analysis with NLP. Further research should explore the found patterns in patient characteristics, treatment choices and outcomes prospectively, and the possibility of translating these into a tool for clinical decision support. |
format | Online Article Text |
id | pubmed-10209137 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-102091372023-05-26 Bayesian network analysis of antidepressant treatment trajectories Turner, Rosanne J. Hagoort, Karin Meijer, Rosa J. Coenen, Femke Scheepers, Floortje E. Sci Rep Article It is currently difficult to successfully choose the correct type of antidepressant for individual patients. To discover patterns in patient characteristics, treatment choices and outcomes, we performed retrospective Bayesian network analysis combined with natural language processing (NLP). This study was conducted at two mental healthcare facilities in the Netherlands. Adult patients admitted and treated with antidepressants between 2014 and 2020 were included. Outcome measures were antidepressant continuation, prescription duration and four treatment outcome topics: core complaints, social functioning, general well-being and patient experience, extracted through NLP of clinical notes. Combined with patient and treatment characteristics, Bayesian networks were constructed at both facilities and compared. Antidepressant choices were continued in 66% and 89% of antidepressant trajectories. Score-based network analysis revealed 28 dependencies between treatment choices, patient characteristics and outcomes. Treatment outcomes and prescription duration were tightly intertwined and interacted with antipsychotics and benzodiazepine co-medication. Tricyclic antidepressant prescription and depressive disorder were important predictors for antidepressant continuation. We show a feasible way of pattern discovery in psychiatry data, through combining network analysis with NLP. Further research should explore the found patterns in patient characteristics, treatment choices and outcomes prospectively, and the possibility of translating these into a tool for clinical decision support. Nature Publishing Group UK 2023-05-24 /pmc/articles/PMC10209137/ /pubmed/37225783 http://dx.doi.org/10.1038/s41598-023-35508-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Turner, Rosanne J. Hagoort, Karin Meijer, Rosa J. Coenen, Femke Scheepers, Floortje E. Bayesian network analysis of antidepressant treatment trajectories |
title | Bayesian network analysis of antidepressant treatment trajectories |
title_full | Bayesian network analysis of antidepressant treatment trajectories |
title_fullStr | Bayesian network analysis of antidepressant treatment trajectories |
title_full_unstemmed | Bayesian network analysis of antidepressant treatment trajectories |
title_short | Bayesian network analysis of antidepressant treatment trajectories |
title_sort | bayesian network analysis of antidepressant treatment trajectories |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209137/ https://www.ncbi.nlm.nih.gov/pubmed/37225783 http://dx.doi.org/10.1038/s41598-023-35508-7 |
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