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Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features
Gastric signet ring cell carcinoma (GSRC) is a special subtype of gastric cancer (GC) associated with poor prognosis, but an in-depth and systematic study of GSRC is lacking. Here, we perform single-cell RNA sequencing to assess GC samples. We identify signet ring cell carcinoma (SRCC) cells. Micros...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209160/ https://www.ncbi.nlm.nih.gov/pubmed/37225691 http://dx.doi.org/10.1038/s41467-023-38426-4 |
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author | Zhao, Weizhu Jia, Yanfei Sun, Guangyu Yang, Haiying Liu, Luguang Qu, Xianlin Ding, Jishuang Yu, Hang Xu, Botao Zhao, Siwei Xing, Ligang Chai, Jie |
author_facet | Zhao, Weizhu Jia, Yanfei Sun, Guangyu Yang, Haiying Liu, Luguang Qu, Xianlin Ding, Jishuang Yu, Hang Xu, Botao Zhao, Siwei Xing, Ligang Chai, Jie |
author_sort | Zhao, Weizhu |
collection | PubMed |
description | Gastric signet ring cell carcinoma (GSRC) is a special subtype of gastric cancer (GC) associated with poor prognosis, but an in-depth and systematic study of GSRC is lacking. Here, we perform single-cell RNA sequencing to assess GC samples. We identify signet ring cell carcinoma (SRCC) cells. Microseminoprotein-beta (MSMB) can be used as a marker gene to guide the identification of moderately/poorly differentiated adenocarcinoma and signet ring cell carcinoma (SRCC). The upregulated differentially expressed genes in SRCC cells are mainly enriched in abnormally activated cancer-related signalling pathways and immune response signalling pathways. SRCC cells are also significantly enriched in mitogen-activated protein kinase and oestrogen signalling pathways, which can interact and promote each other in a positive feedback loop. SRCC cells are shown to have lower cell adhesion and higher immune evasion capabilities as well as an immunosuppressive microenvironment, which may be closely associated with the relatively poor prognosis of GSRC. In summary, GSRC exhibits unique cytological characteristics and a unique immune microenvironment, which may be advantageous for accurate diagnosis and treatment. |
format | Online Article Text |
id | pubmed-10209160 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-102091602023-05-26 Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features Zhao, Weizhu Jia, Yanfei Sun, Guangyu Yang, Haiying Liu, Luguang Qu, Xianlin Ding, Jishuang Yu, Hang Xu, Botao Zhao, Siwei Xing, Ligang Chai, Jie Nat Commun Article Gastric signet ring cell carcinoma (GSRC) is a special subtype of gastric cancer (GC) associated with poor prognosis, but an in-depth and systematic study of GSRC is lacking. Here, we perform single-cell RNA sequencing to assess GC samples. We identify signet ring cell carcinoma (SRCC) cells. Microseminoprotein-beta (MSMB) can be used as a marker gene to guide the identification of moderately/poorly differentiated adenocarcinoma and signet ring cell carcinoma (SRCC). The upregulated differentially expressed genes in SRCC cells are mainly enriched in abnormally activated cancer-related signalling pathways and immune response signalling pathways. SRCC cells are also significantly enriched in mitogen-activated protein kinase and oestrogen signalling pathways, which can interact and promote each other in a positive feedback loop. SRCC cells are shown to have lower cell adhesion and higher immune evasion capabilities as well as an immunosuppressive microenvironment, which may be closely associated with the relatively poor prognosis of GSRC. In summary, GSRC exhibits unique cytological characteristics and a unique immune microenvironment, which may be advantageous for accurate diagnosis and treatment. Nature Publishing Group UK 2023-05-24 /pmc/articles/PMC10209160/ /pubmed/37225691 http://dx.doi.org/10.1038/s41467-023-38426-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zhao, Weizhu Jia, Yanfei Sun, Guangyu Yang, Haiying Liu, Luguang Qu, Xianlin Ding, Jishuang Yu, Hang Xu, Botao Zhao, Siwei Xing, Ligang Chai, Jie Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features |
title | Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features |
title_full | Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features |
title_fullStr | Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features |
title_full_unstemmed | Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features |
title_short | Single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features |
title_sort | single-cell analysis of gastric signet ring cell carcinoma reveals cytological and immune microenvironment features |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209160/ https://www.ncbi.nlm.nih.gov/pubmed/37225691 http://dx.doi.org/10.1038/s41467-023-38426-4 |
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