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ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data

Acoustic telemetry is a popular and cost-efficient method for tracking the movements of animals in the aquatic ecosystem. But data acquired via acoustic telemetry often contains spurious detections that must be identified and excluded by researchers to ensure valid results. Such data management is d...

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Detalles Bibliográficos
Autores principales: Dhellemmes, Félicie, Aspillaga, Eneko, Monk, Christopher T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209445/
https://www.ncbi.nlm.nih.gov/pubmed/37251651
http://dx.doi.org/10.1016/j.mex.2023.102222
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author Dhellemmes, Félicie
Aspillaga, Eneko
Monk, Christopher T.
author_facet Dhellemmes, Félicie
Aspillaga, Eneko
Monk, Christopher T.
author_sort Dhellemmes, Félicie
collection PubMed
description Acoustic telemetry is a popular and cost-efficient method for tracking the movements of animals in the aquatic ecosystem. But data acquired via acoustic telemetry often contains spurious detections that must be identified and excluded by researchers to ensure valid results. Such data management is difficult as the amount of data collected often surpasses the capabilities of simple spreadsheet applications. ATfiltR • ATfiltR compiles telemetry files and identifies and stores all data that was collected outside of your study period (e.g. when your receivers were on land for servicing) elsewhere. • As spurious detections are unlikely to appear sequentially in the data, ATfiltR finds all detections that occurred only once (per receiver or in the whole array) within a user-designated time period and stores them elsewhere. • ATfiltR identifies detections that are impossible given the animals’ swimming speeds and the receivers detection range and stores them elsewhere.
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spelling pubmed-102094452023-05-26 ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data Dhellemmes, Félicie Aspillaga, Eneko Monk, Christopher T. MethodsX Agricultural and Biological Science Acoustic telemetry is a popular and cost-efficient method for tracking the movements of animals in the aquatic ecosystem. But data acquired via acoustic telemetry often contains spurious detections that must be identified and excluded by researchers to ensure valid results. Such data management is difficult as the amount of data collected often surpasses the capabilities of simple spreadsheet applications. ATfiltR • ATfiltR compiles telemetry files and identifies and stores all data that was collected outside of your study period (e.g. when your receivers were on land for servicing) elsewhere. • As spurious detections are unlikely to appear sequentially in the data, ATfiltR finds all detections that occurred only once (per receiver or in the whole array) within a user-designated time period and stores them elsewhere. • ATfiltR identifies detections that are impossible given the animals’ swimming speeds and the receivers detection range and stores them elsewhere. Elsevier 2023-05-14 /pmc/articles/PMC10209445/ /pubmed/37251651 http://dx.doi.org/10.1016/j.mex.2023.102222 Text en © 2023 The Authors. Published by Elsevier B.V. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Dhellemmes, Félicie
Aspillaga, Eneko
Monk, Christopher T.
ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data
title ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data
title_full ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data
title_fullStr ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data
title_full_unstemmed ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data
title_short ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data
title_sort atfiltr: a solution for managing and filtering detections from passive acoustic telemetry data
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209445/
https://www.ncbi.nlm.nih.gov/pubmed/37251651
http://dx.doi.org/10.1016/j.mex.2023.102222
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