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ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data
Acoustic telemetry is a popular and cost-efficient method for tracking the movements of animals in the aquatic ecosystem. But data acquired via acoustic telemetry often contains spurious detections that must be identified and excluded by researchers to ensure valid results. Such data management is d...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209445/ https://www.ncbi.nlm.nih.gov/pubmed/37251651 http://dx.doi.org/10.1016/j.mex.2023.102222 |
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author | Dhellemmes, Félicie Aspillaga, Eneko Monk, Christopher T. |
author_facet | Dhellemmes, Félicie Aspillaga, Eneko Monk, Christopher T. |
author_sort | Dhellemmes, Félicie |
collection | PubMed |
description | Acoustic telemetry is a popular and cost-efficient method for tracking the movements of animals in the aquatic ecosystem. But data acquired via acoustic telemetry often contains spurious detections that must be identified and excluded by researchers to ensure valid results. Such data management is difficult as the amount of data collected often surpasses the capabilities of simple spreadsheet applications. ATfiltR • ATfiltR compiles telemetry files and identifies and stores all data that was collected outside of your study period (e.g. when your receivers were on land for servicing) elsewhere. • As spurious detections are unlikely to appear sequentially in the data, ATfiltR finds all detections that occurred only once (per receiver or in the whole array) within a user-designated time period and stores them elsewhere. • ATfiltR identifies detections that are impossible given the animals’ swimming speeds and the receivers detection range and stores them elsewhere. |
format | Online Article Text |
id | pubmed-10209445 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-102094452023-05-26 ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data Dhellemmes, Félicie Aspillaga, Eneko Monk, Christopher T. MethodsX Agricultural and Biological Science Acoustic telemetry is a popular and cost-efficient method for tracking the movements of animals in the aquatic ecosystem. But data acquired via acoustic telemetry often contains spurious detections that must be identified and excluded by researchers to ensure valid results. Such data management is difficult as the amount of data collected often surpasses the capabilities of simple spreadsheet applications. ATfiltR • ATfiltR compiles telemetry files and identifies and stores all data that was collected outside of your study period (e.g. when your receivers were on land for servicing) elsewhere. • As spurious detections are unlikely to appear sequentially in the data, ATfiltR finds all detections that occurred only once (per receiver or in the whole array) within a user-designated time period and stores them elsewhere. • ATfiltR identifies detections that are impossible given the animals’ swimming speeds and the receivers detection range and stores them elsewhere. Elsevier 2023-05-14 /pmc/articles/PMC10209445/ /pubmed/37251651 http://dx.doi.org/10.1016/j.mex.2023.102222 Text en © 2023 The Authors. Published by Elsevier B.V. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Agricultural and Biological Science Dhellemmes, Félicie Aspillaga, Eneko Monk, Christopher T. ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data |
title | ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data |
title_full | ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data |
title_fullStr | ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data |
title_full_unstemmed | ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data |
title_short | ATfiltR: A solution for managing and filtering detections from passive acoustic telemetry data |
title_sort | atfiltr: a solution for managing and filtering detections from passive acoustic telemetry data |
topic | Agricultural and Biological Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209445/ https://www.ncbi.nlm.nih.gov/pubmed/37251651 http://dx.doi.org/10.1016/j.mex.2023.102222 |
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