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copMEM2: robust and scalable maximum exact match finding

SUMMARY: Finding Maximum Exact Matches, i.e. matches between two strings that cannot be further extended to the left or right, is a classic string problem with applications in genome-to-genome comparisons. The existing tools rarely explicitly address the problem of MEM finding for a pair of very sim...

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Detalles Bibliográficos
Autores principales: Grabowski, Szymon, Bieniecki, Wojciech
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10209524/
https://www.ncbi.nlm.nih.gov/pubmed/37171886
http://dx.doi.org/10.1093/bioinformatics/btad313

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