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ViralConsensus: a fast and memory-efficient tool for calling viral consensus genome sequences directly from read alignment data

MOTIVATION: In viral molecular epidemiology, reconstruction of consensus genomes from sequence data is critical for tracking mutations and variants of concern. However, as the number of samples that are sequenced grows rapidly, compute resources needed to reconstruct consensus genomes can become pro...

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Detalles Bibliográficos
Autor principal: Moshiri, Niema
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10212278/
https://www.ncbi.nlm.nih.gov/pubmed/37171896
http://dx.doi.org/10.1093/bioinformatics/btad317

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