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Automated screening of potential organ donors using a temporal machine learning model

Organ donation is not meeting demand, and yet 30–60% of potential donors are potentially not identified. Current systems rely on manual identification and referral to an Organ Donation Organization (ODO). We hypothesized that developing an automated screening system based on machine learning could r...

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Autores principales: Sauthier, Nicolas, Bouchakri, Rima, Carrier, François Martin, Sauthier, Michaël, Mullie, Louis-Antoine, Cardinal, Héloïse, Fortin, Marie-Chantal, Lahrichi, Nadia, Chassé, Michaël
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10212939/
https://www.ncbi.nlm.nih.gov/pubmed/37231073
http://dx.doi.org/10.1038/s41598-023-35270-w
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author Sauthier, Nicolas
Bouchakri, Rima
Carrier, François Martin
Sauthier, Michaël
Mullie, Louis-Antoine
Cardinal, Héloïse
Fortin, Marie-Chantal
Lahrichi, Nadia
Chassé, Michaël
author_facet Sauthier, Nicolas
Bouchakri, Rima
Carrier, François Martin
Sauthier, Michaël
Mullie, Louis-Antoine
Cardinal, Héloïse
Fortin, Marie-Chantal
Lahrichi, Nadia
Chassé, Michaël
author_sort Sauthier, Nicolas
collection PubMed
description Organ donation is not meeting demand, and yet 30–60% of potential donors are potentially not identified. Current systems rely on manual identification and referral to an Organ Donation Organization (ODO). We hypothesized that developing an automated screening system based on machine learning could reduce the proportion of missed potentially eligible organ donors. Using routine clinical data and laboratory time-series, we retrospectively developed and tested a neural network model to automatically identify potential organ donors. We first trained a convolutive autoencoder that learned from the longitudinal changes of over 100 types of laboratory results. We then added a deep neural network classifier. This model was compared to a simpler logistic regression model. We observed an AUROC of 0.966 (CI 0.949–0.981) for the neural network and 0.940 (0.908–0.969) for the logistic regression model. At a prespecified cutoff, sensitivity and specificity were similar between both models at 84% and 93%. Accuracy of the neural network model was robust across donor subgroups and remained stable in a prospective simulation, while the logistic regression model performance declined when applied to rarer subgroups and in the prospective simulation. Our findings support using machine learning models to help with the identification of potential organ donors using routinely collected clinical and laboratory data.
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spelling pubmed-102129392023-05-27 Automated screening of potential organ donors using a temporal machine learning model Sauthier, Nicolas Bouchakri, Rima Carrier, François Martin Sauthier, Michaël Mullie, Louis-Antoine Cardinal, Héloïse Fortin, Marie-Chantal Lahrichi, Nadia Chassé, Michaël Sci Rep Article Organ donation is not meeting demand, and yet 30–60% of potential donors are potentially not identified. Current systems rely on manual identification and referral to an Organ Donation Organization (ODO). We hypothesized that developing an automated screening system based on machine learning could reduce the proportion of missed potentially eligible organ donors. Using routine clinical data and laboratory time-series, we retrospectively developed and tested a neural network model to automatically identify potential organ donors. We first trained a convolutive autoencoder that learned from the longitudinal changes of over 100 types of laboratory results. We then added a deep neural network classifier. This model was compared to a simpler logistic regression model. We observed an AUROC of 0.966 (CI 0.949–0.981) for the neural network and 0.940 (0.908–0.969) for the logistic regression model. At a prespecified cutoff, sensitivity and specificity were similar between both models at 84% and 93%. Accuracy of the neural network model was robust across donor subgroups and remained stable in a prospective simulation, while the logistic regression model performance declined when applied to rarer subgroups and in the prospective simulation. Our findings support using machine learning models to help with the identification of potential organ donors using routinely collected clinical and laboratory data. Nature Publishing Group UK 2023-05-25 /pmc/articles/PMC10212939/ /pubmed/37231073 http://dx.doi.org/10.1038/s41598-023-35270-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Sauthier, Nicolas
Bouchakri, Rima
Carrier, François Martin
Sauthier, Michaël
Mullie, Louis-Antoine
Cardinal, Héloïse
Fortin, Marie-Chantal
Lahrichi, Nadia
Chassé, Michaël
Automated screening of potential organ donors using a temporal machine learning model
title Automated screening of potential organ donors using a temporal machine learning model
title_full Automated screening of potential organ donors using a temporal machine learning model
title_fullStr Automated screening of potential organ donors using a temporal machine learning model
title_full_unstemmed Automated screening of potential organ donors using a temporal machine learning model
title_short Automated screening of potential organ donors using a temporal machine learning model
title_sort automated screening of potential organ donors using a temporal machine learning model
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10212939/
https://www.ncbi.nlm.nih.gov/pubmed/37231073
http://dx.doi.org/10.1038/s41598-023-35270-w
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