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Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer
Advances in cryogenic transmission electron microscopy have revolutionised the determination of many macromolecular structures at atomic or near-atomic resolution. This method is based on conventional defocused phase contrast imaging. However, it has limitations of weaker contrast for small biologic...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10212999/ https://www.ncbi.nlm.nih.gov/pubmed/37230988 http://dx.doi.org/10.1038/s41467-023-38268-0 |
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author | Pei, Xudong Zhou, Liqi Huang, Chen Boyce, Mark Kim, Judy S. Liberti, Emanuela Hu, Yiming Sasaki, Takeo Nellist, Peter D. Zhang, Peijun Stuart, David I. Kirkland, Angus I. Wang, Peng |
author_facet | Pei, Xudong Zhou, Liqi Huang, Chen Boyce, Mark Kim, Judy S. Liberti, Emanuela Hu, Yiming Sasaki, Takeo Nellist, Peter D. Zhang, Peijun Stuart, David I. Kirkland, Angus I. Wang, Peng |
author_sort | Pei, Xudong |
collection | PubMed |
description | Advances in cryogenic transmission electron microscopy have revolutionised the determination of many macromolecular structures at atomic or near-atomic resolution. This method is based on conventional defocused phase contrast imaging. However, it has limitations of weaker contrast for small biological molecules embedded in vitreous ice, in comparison with cryo-ptychography, which shows increased contrast. Here we report a single-particle analysis based on the use of ptychographic reconstruction data, demonstrating that three dimensional reconstructions with a wide information transfer bandwidth can be recovered by Fourier domain synthesis. Our work suggests future applications in otherwise challenging single particle analyses, including small macromolecules and heterogeneous or flexible particles. In addition structure determination in situ within cells without the requirement for protein purification and expression may be possible. |
format | Online Article Text |
id | pubmed-10212999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-102129992023-05-27 Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer Pei, Xudong Zhou, Liqi Huang, Chen Boyce, Mark Kim, Judy S. Liberti, Emanuela Hu, Yiming Sasaki, Takeo Nellist, Peter D. Zhang, Peijun Stuart, David I. Kirkland, Angus I. Wang, Peng Nat Commun Article Advances in cryogenic transmission electron microscopy have revolutionised the determination of many macromolecular structures at atomic or near-atomic resolution. This method is based on conventional defocused phase contrast imaging. However, it has limitations of weaker contrast for small biological molecules embedded in vitreous ice, in comparison with cryo-ptychography, which shows increased contrast. Here we report a single-particle analysis based on the use of ptychographic reconstruction data, demonstrating that three dimensional reconstructions with a wide information transfer bandwidth can be recovered by Fourier domain synthesis. Our work suggests future applications in otherwise challenging single particle analyses, including small macromolecules and heterogeneous or flexible particles. In addition structure determination in situ within cells without the requirement for protein purification and expression may be possible. Nature Publishing Group UK 2023-05-25 /pmc/articles/PMC10212999/ /pubmed/37230988 http://dx.doi.org/10.1038/s41467-023-38268-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Pei, Xudong Zhou, Liqi Huang, Chen Boyce, Mark Kim, Judy S. Liberti, Emanuela Hu, Yiming Sasaki, Takeo Nellist, Peter D. Zhang, Peijun Stuart, David I. Kirkland, Angus I. Wang, Peng Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer |
title | Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer |
title_full | Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer |
title_fullStr | Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer |
title_full_unstemmed | Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer |
title_short | Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer |
title_sort | cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10212999/ https://www.ncbi.nlm.nih.gov/pubmed/37230988 http://dx.doi.org/10.1038/s41467-023-38268-0 |
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