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Sex differences in the genetics of sarcoidosis across European and African ancestry populations

BACKGROUND: Sex differences in the susceptibility of sarcoidosis are unknown. The study aims to identify sex-dependent genetic variations in two clinical sarcoidosis phenotypes: Löfgren’s syndrome (LS) and non-Löfgren’s syndrome (non-LS). METHODS: A meta-analysis of genome-wide association studies w...

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Autores principales: Xiong, Ying, Kullberg, Susanna, Garman, Lori, Pezant, Nathan, Ellinghaus, David, Vasila, Vasiliki, Eklund, Anders, Rybicki, Benjamin A., Iannuzzi, Michael C., Schreiber, Stefan, Müller-Quernheim, Joachim, Montgomery, Courtney G., Grunewald, Johan, Padyukov, Leonid, Rivera, Natalia V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10213734/
https://www.ncbi.nlm.nih.gov/pubmed/37250650
http://dx.doi.org/10.3389/fmed.2023.1132799
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author Xiong, Ying
Kullberg, Susanna
Garman, Lori
Pezant, Nathan
Ellinghaus, David
Vasila, Vasiliki
Eklund, Anders
Rybicki, Benjamin A.
Iannuzzi, Michael C.
Schreiber, Stefan
Müller-Quernheim, Joachim
Montgomery, Courtney G.
Grunewald, Johan
Padyukov, Leonid
Rivera, Natalia V.
author_facet Xiong, Ying
Kullberg, Susanna
Garman, Lori
Pezant, Nathan
Ellinghaus, David
Vasila, Vasiliki
Eklund, Anders
Rybicki, Benjamin A.
Iannuzzi, Michael C.
Schreiber, Stefan
Müller-Quernheim, Joachim
Montgomery, Courtney G.
Grunewald, Johan
Padyukov, Leonid
Rivera, Natalia V.
author_sort Xiong, Ying
collection PubMed
description BACKGROUND: Sex differences in the susceptibility of sarcoidosis are unknown. The study aims to identify sex-dependent genetic variations in two clinical sarcoidosis phenotypes: Löfgren’s syndrome (LS) and non-Löfgren’s syndrome (non-LS). METHODS: A meta-analysis of genome-wide association studies was conducted on Europeans and African Americans, totaling 10,103 individuals from three population-based cohorts, Sweden (n = 3,843), Germany (n = 3,342), and the United States (n = 2,918), followed by an SNP lookup in the UK Biobank (UKB, n = 387,945). A genome-wide association study based on Immunochip data consisting of 141,000 single nucleotide polymorphisms (SNPs) was conducted in the sex groups. The association test was based on logistic regression using the additive model in LS and non-LS sex groups independently. Additionally, gene-based analysis, gene expression, expression quantitative trait loci (eQTL) mapping, and pathway analysis were performed to discover functionally relevant mechanisms related to sarcoidosis and biological sex. RESULTS: We identified sex-dependent genetic variations in LS and non-LS sex groups. Genetic findings in LS sex groups were explicitly located in the extended Major Histocompatibility Complex (xMHC). In non-LS, genetic differences in the sex groups were primarily located in the MHC class II subregion and ANXA11. Gene-based analysis and eQTL enrichment revealed distinct sex-specific gene expression patterns in various tissues and immune cell types. In LS sex groups, a pathway map related to antigen presentation machinery by IFN-gamma. In non-LS, pathway maps related to immune response lectin-induced complement pathway in males and related to maturation and migration of dendritic cells in skin sensitization in females were identified. CONCLUSION: Our findings provide new evidence for a sex bias underlying sarcoidosis genetic architecture, particularly in clinical phenotypes LS and non-LS. Biological sex likely plays a role in disease mechanisms in sarcoidosis.
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spelling pubmed-102137342023-05-27 Sex differences in the genetics of sarcoidosis across European and African ancestry populations Xiong, Ying Kullberg, Susanna Garman, Lori Pezant, Nathan Ellinghaus, David Vasila, Vasiliki Eklund, Anders Rybicki, Benjamin A. Iannuzzi, Michael C. Schreiber, Stefan Müller-Quernheim, Joachim Montgomery, Courtney G. Grunewald, Johan Padyukov, Leonid Rivera, Natalia V. Front Med (Lausanne) Medicine BACKGROUND: Sex differences in the susceptibility of sarcoidosis are unknown. The study aims to identify sex-dependent genetic variations in two clinical sarcoidosis phenotypes: Löfgren’s syndrome (LS) and non-Löfgren’s syndrome (non-LS). METHODS: A meta-analysis of genome-wide association studies was conducted on Europeans and African Americans, totaling 10,103 individuals from three population-based cohorts, Sweden (n = 3,843), Germany (n = 3,342), and the United States (n = 2,918), followed by an SNP lookup in the UK Biobank (UKB, n = 387,945). A genome-wide association study based on Immunochip data consisting of 141,000 single nucleotide polymorphisms (SNPs) was conducted in the sex groups. The association test was based on logistic regression using the additive model in LS and non-LS sex groups independently. Additionally, gene-based analysis, gene expression, expression quantitative trait loci (eQTL) mapping, and pathway analysis were performed to discover functionally relevant mechanisms related to sarcoidosis and biological sex. RESULTS: We identified sex-dependent genetic variations in LS and non-LS sex groups. Genetic findings in LS sex groups were explicitly located in the extended Major Histocompatibility Complex (xMHC). In non-LS, genetic differences in the sex groups were primarily located in the MHC class II subregion and ANXA11. Gene-based analysis and eQTL enrichment revealed distinct sex-specific gene expression patterns in various tissues and immune cell types. In LS sex groups, a pathway map related to antigen presentation machinery by IFN-gamma. In non-LS, pathway maps related to immune response lectin-induced complement pathway in males and related to maturation and migration of dendritic cells in skin sensitization in females were identified. CONCLUSION: Our findings provide new evidence for a sex bias underlying sarcoidosis genetic architecture, particularly in clinical phenotypes LS and non-LS. Biological sex likely plays a role in disease mechanisms in sarcoidosis. Frontiers Media S.A. 2023-05-11 /pmc/articles/PMC10213734/ /pubmed/37250650 http://dx.doi.org/10.3389/fmed.2023.1132799 Text en Copyright © 2023 Xiong, Kullberg, Garman, Pezant, Ellinghaus, Vasila, Eklund, Rybicki, Iannuzzi, Schreiber, Müller-Quernheim, Montgomery, Grunewald, Padyukov and Rivera. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Xiong, Ying
Kullberg, Susanna
Garman, Lori
Pezant, Nathan
Ellinghaus, David
Vasila, Vasiliki
Eklund, Anders
Rybicki, Benjamin A.
Iannuzzi, Michael C.
Schreiber, Stefan
Müller-Quernheim, Joachim
Montgomery, Courtney G.
Grunewald, Johan
Padyukov, Leonid
Rivera, Natalia V.
Sex differences in the genetics of sarcoidosis across European and African ancestry populations
title Sex differences in the genetics of sarcoidosis across European and African ancestry populations
title_full Sex differences in the genetics of sarcoidosis across European and African ancestry populations
title_fullStr Sex differences in the genetics of sarcoidosis across European and African ancestry populations
title_full_unstemmed Sex differences in the genetics of sarcoidosis across European and African ancestry populations
title_short Sex differences in the genetics of sarcoidosis across European and African ancestry populations
title_sort sex differences in the genetics of sarcoidosis across european and african ancestry populations
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10213734/
https://www.ncbi.nlm.nih.gov/pubmed/37250650
http://dx.doi.org/10.3389/fmed.2023.1132799
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