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Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables
This paper presents a simple method for detecting both biotic and abiotic stress in plants. Stress levels are measured based on the increase in nutrient uptake by plants as a mechanism of self-defense when under stress. A continuous electrical resistance measurement was used to estimate the rate of...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10215062/ https://www.ncbi.nlm.nih.gov/pubmed/37237041 http://dx.doi.org/10.1038/s41598-023-35285-3 |
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author | Kumar, Mridul Saifi, Zeeshan Krishnananda, Soami Daya |
author_facet | Kumar, Mridul Saifi, Zeeshan Krishnananda, Soami Daya |
author_sort | Kumar, Mridul |
collection | PubMed |
description | This paper presents a simple method for detecting both biotic and abiotic stress in plants. Stress levels are measured based on the increase in nutrient uptake by plants as a mechanism of self-defense when under stress. A continuous electrical resistance measurement was used to estimate the rate of change of nutrients in agarose as the growth medium for Cicer arietinum (Chickpea) seeds. To determine the concentration of charge carriers in the growth medium, Drude’s model was used. For identifying anomalies and forecasting plant stress, two experiments were conducted and outliers were found in electrical resistance and relative changes in carrier concentration. Anomaly in the first iteration was detected by applying k-Nearest Neighbour, One Class Support Vector Machine and Local Outlier Factor in unsupervised mode on electrical resistance data. In the second iteration, the neural network-based Long Short Term Memory method was used on the relative change in the carrier concentration data. As a result of the change in resistance of growth media during stress, nutrient concentrations shifted by 35%, as previously reported. Farmers who cater to small communities around them and are most affected by local and global stress factors can use this method of forecasting. |
format | Online Article Text |
id | pubmed-10215062 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-102150622023-05-28 Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables Kumar, Mridul Saifi, Zeeshan Krishnananda, Soami Daya Sci Rep Article This paper presents a simple method for detecting both biotic and abiotic stress in plants. Stress levels are measured based on the increase in nutrient uptake by plants as a mechanism of self-defense when under stress. A continuous electrical resistance measurement was used to estimate the rate of change of nutrients in agarose as the growth medium for Cicer arietinum (Chickpea) seeds. To determine the concentration of charge carriers in the growth medium, Drude’s model was used. For identifying anomalies and forecasting plant stress, two experiments were conducted and outliers were found in electrical resistance and relative changes in carrier concentration. Anomaly in the first iteration was detected by applying k-Nearest Neighbour, One Class Support Vector Machine and Local Outlier Factor in unsupervised mode on electrical resistance data. In the second iteration, the neural network-based Long Short Term Memory method was used on the relative change in the carrier concentration data. As a result of the change in resistance of growth media during stress, nutrient concentrations shifted by 35%, as previously reported. Farmers who cater to small communities around them and are most affected by local and global stress factors can use this method of forecasting. Nature Publishing Group UK 2023-05-26 /pmc/articles/PMC10215062/ /pubmed/37237041 http://dx.doi.org/10.1038/s41598-023-35285-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kumar, Mridul Saifi, Zeeshan Krishnananda, Soami Daya Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables |
title | Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables |
title_full | Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables |
title_fullStr | Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables |
title_full_unstemmed | Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables |
title_short | Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables |
title_sort | decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10215062/ https://www.ncbi.nlm.nih.gov/pubmed/37237041 http://dx.doi.org/10.1038/s41598-023-35285-3 |
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