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Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions

SIMPLE SUMMARY: The species distribution model has been widely used to predict the distribution of invasive plant species based on bioclimatic variables. However, the specific selection of bioclimate variables may affect the performance of the species distribution model. Here, we tested a new biocli...

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Autores principales: Zhang, Feixue, Wang, Chunjing, Zhang, Chunhui, Wan, Jizhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10215630/
https://www.ncbi.nlm.nih.gov/pubmed/37237466
http://dx.doi.org/10.3390/biology12050652
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author Zhang, Feixue
Wang, Chunjing
Zhang, Chunhui
Wan, Jizhong
author_facet Zhang, Feixue
Wang, Chunjing
Zhang, Chunhui
Wan, Jizhong
author_sort Zhang, Feixue
collection PubMed
description SIMPLE SUMMARY: The species distribution model has been widely used to predict the distribution of invasive plant species based on bioclimatic variables. However, the specific selection of bioclimate variables may affect the performance of the species distribution model. Here, we tested a new bioclimate variable dataset (i.e., CMCC BioClimInd) and used it in the species distribution model. We evaluated the predictive performance and explanatory power of WorldClim and CMCC-BioClimInd using AUC and omission rate, and also used the ODMAP protocol to record CMCC-BioClimInd to ensure reproducibility. The results indicate that CMCC BioClimInd can effectively simulate the distribution of invasive plant species. Based on the contribution rate of CMCC-BioClimInd to the distribution of invasive plant species, we inferred that the modified simplified continentality index and modified Kira warmth index from CMCC-BioClimInd had a strong explanatory power. Under the 35 bioclimatic variables of CMCC-BioClimInd, alien invasive plant species are mainly distributed in equatorial, tropical and subtropical regions. We tested a new bioclimate variable dataset to simulate the distribution of invasive plant species worldwide. Our research provides a new perspective for risk assessment and management of global invasive plant species. ABSTRACT: Species distribution modeling (SDM) has been widely used to predict the distribution of invasive plant species based on bioclimatic variables. However, the specific selection of these variables may affect the performance of SDM. This investigation elucidates a new bioclimate variable dataset (i.e., CMCC-BioClimInd) for its use in SDM. The predictive performance of SDM that includes WorldClim and CMCC-BioClimInd was evaluated by AUC and omission rate and the explanatory power of both datasets was assessed by the jackknife method. Furthermore, the ODMAP protocol was used to record CMCC-BioClimInd to ensure reproducibility. The results indicated that CMCC-BioClimInd effectively simulates invasive plant species’ distribution. Based on the contribution rate of CMCC-BioClimInd to the distribution of invasive plant species, it was inferred that the modified and simplified continentality and Kira warmth index from CMCC-BioClimInd had a strong explanatory power. Under the 35 bioclimatic variables of CMCC-BioClimInd, alien invasive plant species are mainly distributed in equatorial, tropical, and subtropical regions. We tested a new bioclimate variable dataset to simulate the distribution of invasive plant species worldwide. This method has great potential to improve the efficiency of species distribution modeling, thereby providing a new perspective for risk assessment and management of global invasive plant species.
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spelling pubmed-102156302023-05-27 Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions Zhang, Feixue Wang, Chunjing Zhang, Chunhui Wan, Jizhong Biology (Basel) Article SIMPLE SUMMARY: The species distribution model has been widely used to predict the distribution of invasive plant species based on bioclimatic variables. However, the specific selection of bioclimate variables may affect the performance of the species distribution model. Here, we tested a new bioclimate variable dataset (i.e., CMCC BioClimInd) and used it in the species distribution model. We evaluated the predictive performance and explanatory power of WorldClim and CMCC-BioClimInd using AUC and omission rate, and also used the ODMAP protocol to record CMCC-BioClimInd to ensure reproducibility. The results indicate that CMCC BioClimInd can effectively simulate the distribution of invasive plant species. Based on the contribution rate of CMCC-BioClimInd to the distribution of invasive plant species, we inferred that the modified simplified continentality index and modified Kira warmth index from CMCC-BioClimInd had a strong explanatory power. Under the 35 bioclimatic variables of CMCC-BioClimInd, alien invasive plant species are mainly distributed in equatorial, tropical and subtropical regions. We tested a new bioclimate variable dataset to simulate the distribution of invasive plant species worldwide. Our research provides a new perspective for risk assessment and management of global invasive plant species. ABSTRACT: Species distribution modeling (SDM) has been widely used to predict the distribution of invasive plant species based on bioclimatic variables. However, the specific selection of these variables may affect the performance of SDM. This investigation elucidates a new bioclimate variable dataset (i.e., CMCC-BioClimInd) for its use in SDM. The predictive performance of SDM that includes WorldClim and CMCC-BioClimInd was evaluated by AUC and omission rate and the explanatory power of both datasets was assessed by the jackknife method. Furthermore, the ODMAP protocol was used to record CMCC-BioClimInd to ensure reproducibility. The results indicated that CMCC-BioClimInd effectively simulates invasive plant species’ distribution. Based on the contribution rate of CMCC-BioClimInd to the distribution of invasive plant species, it was inferred that the modified and simplified continentality and Kira warmth index from CMCC-BioClimInd had a strong explanatory power. Under the 35 bioclimatic variables of CMCC-BioClimInd, alien invasive plant species are mainly distributed in equatorial, tropical, and subtropical regions. We tested a new bioclimate variable dataset to simulate the distribution of invasive plant species worldwide. This method has great potential to improve the efficiency of species distribution modeling, thereby providing a new perspective for risk assessment and management of global invasive plant species. MDPI 2023-04-26 /pmc/articles/PMC10215630/ /pubmed/37237466 http://dx.doi.org/10.3390/biology12050652 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Feixue
Wang, Chunjing
Zhang, Chunhui
Wan, Jizhong
Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions
title Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions
title_full Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions
title_fullStr Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions
title_full_unstemmed Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions
title_short Comparing the Performance of CMCC-BioClimInd and WorldClim Datasets in Predicting Global Invasive Plant Distributions
title_sort comparing the performance of cmcc-bioclimind and worldclim datasets in predicting global invasive plant distributions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10215630/
https://www.ncbi.nlm.nih.gov/pubmed/37237466
http://dx.doi.org/10.3390/biology12050652
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