Cargando…

MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals

Electroencephalogram (EEG) signals immensely suffer from several physiological artifacts, including electrooculogram (EOG), electromyogram (EMG), and electrocardiogram (ECG) artifacts, which must be removed to ensure EEG’s usability. This paper proposes a novel one-dimensional convolutional neural n...

Descripción completa

Detalles Bibliográficos
Autores principales: Hossain, Md Shafayet, Mahmud, Sakib, Khandakar, Amith, Al-Emadi, Nasser, Chowdhury, Farhana Ahmed, Mahbub, Zaid Bin, Reaz, Mamun Bin Ibne, Chowdhury, Muhammad E. H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10215884/
https://www.ncbi.nlm.nih.gov/pubmed/37237649
http://dx.doi.org/10.3390/bioengineering10050579
_version_ 1785048169182134272
author Hossain, Md Shafayet
Mahmud, Sakib
Khandakar, Amith
Al-Emadi, Nasser
Chowdhury, Farhana Ahmed
Mahbub, Zaid Bin
Reaz, Mamun Bin Ibne
Chowdhury, Muhammad E. H.
author_facet Hossain, Md Shafayet
Mahmud, Sakib
Khandakar, Amith
Al-Emadi, Nasser
Chowdhury, Farhana Ahmed
Mahbub, Zaid Bin
Reaz, Mamun Bin Ibne
Chowdhury, Muhammad E. H.
author_sort Hossain, Md Shafayet
collection PubMed
description Electroencephalogram (EEG) signals immensely suffer from several physiological artifacts, including electrooculogram (EOG), electromyogram (EMG), and electrocardiogram (ECG) artifacts, which must be removed to ensure EEG’s usability. This paper proposes a novel one-dimensional convolutional neural network (1D-CNN), i.e., MultiResUNet3+, to denoise physiological artifacts from corrupted EEG. A publicly available dataset containing clean EEG, EOG, and EMG segments is used to generate semi-synthetic noisy EEG to train, validate and test the proposed MultiResUNet3+, along with four other 1D-CNN models (FPN, UNet, MCGUNet, LinkNet). Adopting a five-fold cross-validation technique, all five models’ performance is measured by estimating temporal and spectral percentage reduction in artifacts, temporal and spectral relative root mean squared error, and average power ratio of each of the five EEG bands to whole spectra. The proposed MultiResUNet3+ achieved the highest temporal and spectral percentage reduction of 94.82% and 92.84%, respectively, in EOG artifacts removal from EOG-contaminated EEG. Moreover, compared to the other four 1D-segmentation models, the proposed MultiResUNet3+ eliminated 83.21% of the spectral artifacts from the EMG-corrupted EEG, which is also the highest. In most situations, our proposed model performed better than the other four 1D-CNN models, evident by the computed performance evaluation metrics.
format Online
Article
Text
id pubmed-10215884
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-102158842023-05-27 MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals Hossain, Md Shafayet Mahmud, Sakib Khandakar, Amith Al-Emadi, Nasser Chowdhury, Farhana Ahmed Mahbub, Zaid Bin Reaz, Mamun Bin Ibne Chowdhury, Muhammad E. H. Bioengineering (Basel) Article Electroencephalogram (EEG) signals immensely suffer from several physiological artifacts, including electrooculogram (EOG), electromyogram (EMG), and electrocardiogram (ECG) artifacts, which must be removed to ensure EEG’s usability. This paper proposes a novel one-dimensional convolutional neural network (1D-CNN), i.e., MultiResUNet3+, to denoise physiological artifacts from corrupted EEG. A publicly available dataset containing clean EEG, EOG, and EMG segments is used to generate semi-synthetic noisy EEG to train, validate and test the proposed MultiResUNet3+, along with four other 1D-CNN models (FPN, UNet, MCGUNet, LinkNet). Adopting a five-fold cross-validation technique, all five models’ performance is measured by estimating temporal and spectral percentage reduction in artifacts, temporal and spectral relative root mean squared error, and average power ratio of each of the five EEG bands to whole spectra. The proposed MultiResUNet3+ achieved the highest temporal and spectral percentage reduction of 94.82% and 92.84%, respectively, in EOG artifacts removal from EOG-contaminated EEG. Moreover, compared to the other four 1D-segmentation models, the proposed MultiResUNet3+ eliminated 83.21% of the spectral artifacts from the EMG-corrupted EEG, which is also the highest. In most situations, our proposed model performed better than the other four 1D-CNN models, evident by the computed performance evaluation metrics. MDPI 2023-05-10 /pmc/articles/PMC10215884/ /pubmed/37237649 http://dx.doi.org/10.3390/bioengineering10050579 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hossain, Md Shafayet
Mahmud, Sakib
Khandakar, Amith
Al-Emadi, Nasser
Chowdhury, Farhana Ahmed
Mahbub, Zaid Bin
Reaz, Mamun Bin Ibne
Chowdhury, Muhammad E. H.
MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals
title MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals
title_full MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals
title_fullStr MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals
title_full_unstemmed MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals
title_short MultiResUNet3+: A Full-Scale Connected Multi-Residual UNet Model to Denoise Electrooculogram and Electromyogram Artifacts from Corrupted Electroencephalogram Signals
title_sort multiresunet3+: a full-scale connected multi-residual unet model to denoise electrooculogram and electromyogram artifacts from corrupted electroencephalogram signals
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10215884/
https://www.ncbi.nlm.nih.gov/pubmed/37237649
http://dx.doi.org/10.3390/bioengineering10050579
work_keys_str_mv AT hossainmdshafayet multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals
AT mahmudsakib multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals
AT khandakaramith multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals
AT alemadinasser multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals
AT chowdhuryfarhanaahmed multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals
AT mahbubzaidbin multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals
AT reazmamunbinibne multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals
AT chowdhurymuhammadeh multiresunet3afullscaleconnectedmultiresidualunetmodeltodenoiseelectrooculogramandelectromyogramartifactsfromcorruptedelectroencephalogramsignals